Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03295 ATGCTTTCCATGGCAAATGCAGGGCCCCATACAAATGGTTCTCAGTTTTTTATATGTACTGCCAAGACTGAATGGCTTGATGGGAAGCATGTTGTGTTTGGAAAAGTTATTGATGGGTACAGTGTGGTTAAGGAGATGGAGAAGGTTGGTTCAAATGCTGGGAAGACATCTGAACCGGTTGTTATAGAAGATTGTGATGATTTAGAAGAGAAGTACCACACAGTACACTAA 231 0.4113 MLSMANAGPHTNGSQFFICTAKTEWLDGKHVVFGKVIDGYSVVKEMEKVGSNAGKTSEPVVIEDCDDLEEKYHTVH 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03295 76 SUPERFAMILY Cyclophilin-like 1 71 IPR029000 -
Aip04g03295 76 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 67 IPR002130 GO:0000413|GO:0003755
Aip04g03295 76 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 67 - -
Aip04g03295 76 Gene3D - 1 75 IPR029000 -
Aip04g03295 76 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 67 - -
Aip04g03295 76 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 65 IPR002130 GO:0000413|GO:0003755
Aip04g03295 76 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Aip04g03295 76 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 27 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03295 Aip-Chr4 127360056 127360450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03295 1 49 U-box Gene Family AT5G67530 51.020 1.96e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03295 K01802 - aip:107637297 132.494