Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03281 ATGGAGGGGATGTTGAGCCTCAACACTGAAGCAAGTAATGATGAAAATCCCAAGCAGCAATCCTCTTCTCTTGCAAATTTTGCAAAGAATTATCCTCCTAGCTTTCCTAGAAAGGTACTGGCAGAGATAATAGGGACATATTTATTGGTGTTTGTGGGAAGTGGTTCAGCTGGACTTAGTGCCATTGATGAAAACAAGGTATCAAAATTGGGAGCTTCACTTGCAGGAGGATTCATTGTAACGGTTATGATCTACTCCATTGGACACATCTCCGGGGCACATATGAATCCAGCTGTTTCCTTAGCTTTTGCCTCCATCAACCGTTTTCCTTGGAAACAGGTACCATTTTATATTGCAGCCCAACTAACAGGAGCAATATGTGCTTCATACACACTGAGGGTGTTGCTAGAACCAGCAACACAAATTGGTGCCACGTCACCCTCAGGGTCAAACATTCAAGCACTTGTCATGGAAATTGTTGCCACATTCACTATGGTCTTCATATCCGCTGCTGTTGCCACTGACCCTAAAGCTATTGGAGAGCTATCAGGGGTAGCAGTAGGTTCTTCAGTTAGCATAGCTAGCATTGTAGCTGGACCAATATCAGGGGGGTCAATGAACCCAGCAAGGTCATTAGGTCCTGCAATTGCCACTGCATCTTATAAGGGTATTTGGGTCTATTTTGTTGGACCAATCACTGGGGCACTCTTAGGGGTATGGTCCTACACTGTGGTTCAAGACATAGATAATAATAAGCCACCTCCTTCTTCTTCCCTTTCATCAATATTGGGCCAGAGAATTATTAGTAGTGAAGCTGAGCATGTTGCTAACAAAGATCACTTCAGTTCTCTGTGA 855 0.4386 MEGMLSLNTEASNDENPKQQSSSLANFAKNYPPSFPRKVLAEIIGTYLLVFVGSGSAGLSAIDENKVSKLGASLAGGFIVTVMIYSIGHISGAHMNPAVSLAFASINRFPWKQVPFYIAAQLTGAICASYTLRVLLEPATQIGATSPSGSNIQALVMEIVATFTMVFISAAVATDPKAIGELSGVAVGSSVSIASIVAGPISGGSMNPARSLGPAIATASYKGIWVYFVGPITGALLGVWSYTVVQDIDNNKPPPSSSLSSILGQRIISSEAEHVANKDHFSSL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03281 284 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03281 284 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03281 284 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03281 284 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03281 284 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03281 284 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03281 284 SUPERFAMILY Aquaporin-like 32 251 IPR023271 -
Aip04g03281 284 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Aip04g03281 284 PANTHER AQUAPORIN NIP2-1 17 257 IPR034294 -
Aip04g03281 284 Gene3D Glycerol uptake facilitator protein. 4 255 IPR023271 -
Aip04g03281 284 MobiDBLite consensus disorder prediction 1 22 - -
Aip04g03281 284 CDD MIP 37 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03281 284 Pfam Major intrinsic protein 34 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03281 284 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 17 257 - -
Aip04g03281 284 TIGRFAM MIP: MIP family channel proteins 41 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03281 Aip-Chr4 127188429 127192164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03281 37 250 Major Intrinsic Protein MIP AT5G37820 50.463 5.89e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03281 K09874 - gmx:100795261 339.732