Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03279 ATGGACATAGCAGCACAAACAACAATCAACAACAACAACATCAACAATAGTAGCACTACTCCAACAAAATCATCACCACCAACTGAAGAACATGAAACTGAAACACCAACTAGGATTATTCAAAACACCACTACTACTACTACTACTACAACCATACCCAACACACCAACACCATCAAAGGCTTTAACTTTCTCAAATGGGGTCCTAAAACGCCACCAATGCCGTGAGCCAGAGGACCCGCTTATCTCCTCTGCCTTCGAGTTTCATTCACAAAACCGCCACCATCCTCCTCCACCGCCTCCTCCACCGCCTCACCGGAGCCCTAACTCGGCATCTCCGCCGCCGATCTCCTCCGCTTACTATCACCACCCGTCAGCAGCACCTCACATGCTACTTGCCCTCTCCGGCGCTGGCATCGCCGCGCCGCCGGAGAGCACCGCGGCACCAATTTCCGCCGCCGCAGCTTTAGCTTCTCCGAGGAAGAGGTTCAGGACGAAGTTCAGCCAGGAGCAGAAGGAGAAGATGCACAAGTTCGCAGAGCGTGTCGGGTGGAAGATGCAGAAGAGAGACGATGATTTGGTTCAAGAGTTCTGCAGCGAGGTTGGCGTTGATCGTGGTGTTCTCAAAGTCTGGATGCATAACAACAAGAACAATCTCGCAAAGAAAGAGAGTAATGGCGCTGCTGTTACCACCATTAACGGTGGTGTTGGTGTTCTTGGTAGTGGTGGTGGTAGCAGAAGCATTATTATGGAGGAAGATCCTAATAATAACAACAACAACAATGGTAATGGTGTTGGTGTTGGTGTTAATGGCGGTGCTAATGGTTCTTCTTCTTCTTCTTAA 843 0.497 MDIAAQTTINNNNINNSSTTPTKSSPPTEEHETETPTRIIQNTTTTTTTTTIPNTPTPSKALTFSNGVLKRHQCREPEDPLISSAFEFHSQNRHHPPPPPPPPPHRSPNSASPPPISSAYYHHPSAAPHMLLALSGAGIAAPPESTAAPISAAAALASPRKRFRTKFSQEQKEKMHKFAERVGWKMQKRDDDLVQEFCSEVGVDRGVLKVWMHNNKNNLAKKESNGAAVTTINGGVGVLGSGGGSRSIIMEEDPNNNNNNNGNGVGVGVNGGANGSSSSS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03279 280 MobiDBLite consensus disorder prediction 1 62 - -
Aip04g03279 280 SUPERFAMILY Homeodomain-like 154 221 IPR009057 -
Aip04g03279 280 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 74 232 - -
Aip04g03279 280 MobiDBLite consensus disorder prediction 93 111 - -
Aip04g03279 280 MobiDBLite consensus disorder prediction 1 26 - -
Aip04g03279 280 MobiDBLite consensus disorder prediction 250 280 - -
Aip04g03279 280 MobiDBLite consensus disorder prediction 37 62 - -
Aip04g03279 280 MobiDBLite consensus disorder prediction 89 122 - -
Aip04g03279 280 Gene3D - 149 222 - -
Aip04g03279 280 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 74 232 - -
Aip04g03279 280 MobiDBLite consensus disorder prediction 245 280 - -
Aip04g03279 280 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 160 217 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03279 Aip-Chr4 127101809 127103192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03279 129 246 ZF-HD Transcription Factor Family AT3G28920 51.852 3.60e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03279 - - aip:107635330 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02979 10 125994231 125995373 Aip04g03279 04 127101809 127103192 PCT