Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03257 ATGAGTCCTAAAACAAGAATGGGAATTACTATTACTATTCTCATCTTCACCCAAATCTTGCTCTGCATTCATGCTACTGAAACAGATATATTCTGTTTAAAATCCATCAAGGATTCCTTGGAAGATCCATATAATTTCTTAGCTAGCTGGGACTTCAACAACAAAACCGAAGGTGTTATTTGTAATTTTGTGGGTGTTAGTTGCTGGAATCCCAATGAAAACAGAGTGCTAGGAATCGACCTGTCAAACATGAGGCTGAAGGGCCAGTTTCCGCGGGGACTTCATAATTGCACTTCATTAACTGCCTTAGACCTTTCATCAAACAGCTTATGGGCACCTCTCCCCTCTGATATTCATACATTACTCCCTTTCGCTGTCTCCATTGATCTCTCCAATAACAACTTCAGCGGACAGATTCCACCATCTCTCGCTAGCTGCACTTACCTGAATGTTCTCAAGCTTGATGGCAACATGCTCACTGGTGGAATCCCGGGTCAACTTGCGGCGCTTCCCAGGATTCGAACACTGTCTTTTGACAACAATAGGTTGTCAGGGGAAGTGCCTAACTTGGCATATGGTTCGGTAAGTGTTAGCTATGCTAAGAATAGGGGGCTTTGTGGAGGGCCCTTGGAACCATGCTCCTTCGACGGAGGAGGAGGGCTTATTATCATGGACCAATCCTTCAAGGATGGCCTTTTTGTTGGTTTTGCATCATCGTTTAGTTTTCTTCTTGCGTGCATCTTTTTCCTTTCAAATAGTTACTGGGCAAAATTATTGAAGTGGATCAAACACAATAAAGGTGTAGAACTAGTCAAATATGTGTGTTCCATCATCACAGGGAGAAAGCTCGGAATAGAAGCTGATCAGATGCCTCAATTGCAGGAGAAAGGAAGCCAAAAGATAGCTCTACTACTGGAAAGATTAACATCCACTATGAAGTTTGAAGAACTAAATGATGCAACGGACGGATTTTCTATAAACAATGCAATTGGGTTTGGAAAGATGGGAATAATGTACAAGGGAACATTGGCTAACGGTTGGCACCTAGCCATTAAGAAACTAACTGATTCTCAACAATTTGGGAGACAAGTTCTTATAGAAATAAGGATTCTAGGTAAGCTCCGACACAGAAACATAGTTCCCCTGCTTGGGTTCTGCATTGAAAACGATGAAAGGATTCTGGTGTACCCGTATTTCTCAAATGGAAGACTCTCGAAATGGTTGCACCCTTTGGAAACTGAGGCTATGATATTGACATGGCCACAGAGGATTAACATTGCACTAGGTGTGGCTAGAGCCTTATCTTGGCTCCATCATTTATGCAATCTGCATGTGGTGCACTTGAATATTTGTTCACGGAGTATCTTGCTAGATAAGAATTTTGAACCCAAGTGA 1395 0.4215 MSPKTRMGITITILIFTQILLCIHATETDIFCLKSIKDSLEDPYNFLASWDFNNKTEGVICNFVGVSCWNPNENRVLGIDLSNMRLKGQFPRGLHNCTSLTALDLSSNSLWAPLPSDIHTLLPFAVSIDLSNNNFSGQIPPSLASCTYLNVLKLDGNMLTGGIPGQLAALPRIRTLSFDNNRLSGEVPNLAYGSVSVSYAKNRGLCGGPLEPCSFDGGGGLIIMDQSFKDGLFVGFASSFSFLLACIFFLSNSYWAKLLKWIKHNKGVELVKYVCSIITGRKLGIEADQMPQLQEKGSQKIALLLERLTSTMKFEELNDATDGFSINNAIGFGKMGIMYKGTLANGWHLAIKKLTDSQQFGRQVLIEIRILGKLRHRNIVPLLGFCIENDERILVYPYFSNGRLSKWLHPLETEAMILTWPQRINIALGVARALSWLHHLCNLHVVHLNICSRSILLDKNFEPK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03257 464 SUPERFAMILY Protein kinase-like (PK-like) 306 464 IPR011009 -
Aip04g03257 464 Pfam Leucine rich repeat N-terminal domain 28 69 IPR013210 -
Aip04g03257 464 Gene3D Phosphorylase Kinase; domain 1 285 398 - -
Aip04g03257 464 ProSiteProfiles Protein kinase domain profile. 324 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03257 464 Gene3D Ribonuclease Inhibitor 27 214 IPR032675 -
Aip04g03257 464 PANTHER RECEPTOR-LIKE PROTEIN 55 11 464 - -
Aip04g03257 464 Pfam Protein tyrosine and serine/threonine kinase 326 460 IPR001245 GO:0004672|GO:0006468
Aip04g03257 464 Gene3D Transferase(Phosphotransferase) domain 1 399 464 - -
Aip04g03257 464 SUPERFAMILY L domain-like 27 454 - -
Aip04g03257 464 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 11 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03257 Aip-Chr4 126700716 126702847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03257 19 464 Receptor kinase-like Gene Family AT3G28450 39.121 2.23e-93 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Aip04g03257 PK_Tyr_Ser-Thr 3.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03257 - - aip:107637285 931.784