Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03216 atgtccgcgcgacaaaagTGCAACCAGTTGTCCCCACCTGTGGAGCATCGGGCCTTCACCCTCGAAGAGGATGACACCATAATCAGAGCTCACACTCGGTTCGGCAACAAGTGGGCCACCATAGCCCGACTCCTTTCCGGCAGAACCGACAATGCTATTAAGAACCACTGGAACTCCACCCTCAAACGCAAGTGCGCCTCCACGGGCCCCATCGACGATCCTCACTTCGCGCAGCCACTCAAACGCTCCGTCAGCACCAGTGCCGCCGTACTCGTGTCAACGGTGGTGGTGAGGTACTTGTTGCCGACGGTGATGGCGACGACGGAGGTGGCGGGCCGTGGTCCAACTCATCCATGCCCTTCACCACTTTGA 372 0.5645 MSARQKCNQLSPPVEHRAFTLEEDDTIIRAHTRFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASTGPIDDPHFAQPLKRSVSTSAAVLVSTVVVRYLLPTVMATTEVAGRGPTHPCPSPL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03216 123 Gene3D - 18 85 - -
Aip04g03216 123 ProSiteProfiles Myb-like domain profile. 11 61 IPR001005 -
Aip04g03216 123 PANTHER TRANSCRIPTION FACTOR MYB73 7 90 - -
Aip04g03216 123 Pfam Myb-like DNA-binding domain 18 60 IPR001005 -
Aip04g03216 123 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 65 IPR017930 -
Aip04g03216 123 SUPERFAMILY Homeodomain-like 7 65 IPR009057 -
Aip04g03216 123 CDD SANT 18 61 IPR001005 -
Aip04g03216 123 PANTHER MYB PROTEIN-RELATED 7 90 - -
Aip04g03216 123 SMART sant 15 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03216 Aip-Chr4 126202621 126203524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03216 7 90 MYB Transcription Factor Family AT4G37260 64.583 2.39e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip04g03216 Myb_DNA-binding 1.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03216 K09422 - aip:107641435 211.846