Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03211 ATGGCAGAAAGTACAAGGAAACTTGCCCTTATTTTCTTGGTTACTTTTGCCATTGTTATTCCATGCATTAAGGCTGGCATTGCTGAATATGATGATTTTCTCAAGGCACAAGCTGAGATGGCCCATGAAATTGCTCTTGAGTCCTTCGTTCCTAATCCCTTGAATGTTACATCTGAGCTCAATCTCCACGTTCATCTGAAACACCGTAATTGTCCATACCATATGCAATAA 231 0.4026 MAESTRKLALIFLVTFAIVIPCIKAGIAEYDDFLKAQAEMAHEIALESFVPNPLNVTSELNLHVHLKHRNCPYHMQ 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03211 76 Pfam Pectate lyase, N terminus 27 66 IPR007524 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03211 Aip-Chr4 126177105 126179980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03211 14 66 Polysaccharide Lyase AT2G02720 39.623 1.17e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03211 - K01728 gmx:100780236 95.1301