Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03205 ATGGGGTTTGAGAATAATGCAATTAAAGCAGGGAGTTTAGATGTTGAAAAGTCAAAGGGAGGGAAGAAGAAGAAGAAGAAGAATAGAGATGGTGATGAGAGTGGATGTTGCCTTAGATTGAGTTTCATTGGAAGTTGCATACCTTCAAGATCAAAGGTTGATAACTCCATAAGTGGCACCACTACTAGTGCTCATAGTTATAAAGCATCTGCATATGAGAGAAGCAAGAGGGAAGCAAGTGCGGCACCAGAGTCCTCAACAACAACTAGTAATGCTGGAAGTGTCCCGTCGACTCCGAAGTTCAGCGAGGAGTTGAAGGTTTCTCCTCGGTTGCGAAAATTCACCTTCAATGAGCTTAAGTTGGCAACTAGGAACTTCAAACCGGAGAGTCTTCTCGGCGAGGGAGGGTTCGGTTGTGTCTTCAAGGGTTGGATTGAGGAGAATGGAACTGCACCTGTGAGACCGGGGACCGGTCTTACTGTTGCAGTCAAGACCCTTAACCATGATGGACTTCAGGGTCACAAAGAGTGGCTTGCTGAATTAAACATTCTTGGTGATCTTGTCCATCCTAATCTTGTAAAATTGATTGGTTTCTGCATTGAAGATGACCAAAGATTATTGGTTTATGAGTTTATGCCCCGAGGGAGCTTAGAGAACCACCTCTTTAGAAAAGGGTCTATGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTGCTTTTCTCCATGAAGAAGCTCAGAGGCCCGTAATCTATCGTGATTTCAAGACATCTAACATACTATTAGATGCGGAATACAATGCAAAGCTCTCTGATTTTGGACTCGCCAAAGATGGTCCCGAAGGGGAGAAGACACACATATCTACAAGAGTTATGGGAACATATGGCTATGCAGCTCCTGAGTATGTGATGACGGGACATTTGACGACGAAAAGTGATGTCTATAGTTTCGGAGTAGTGCTACTGGAAATGCTCACCGGCCGGCGATCTATTGATAAGAATAGACCAAATGGGGAGCACAACCTTGTGGAATGGGCAAGACCTTTTATCTTAGACCGAAGAATGTTCTATCGGATAATCGACCATCGCCTTGAAGGCCACTTCTCCATTAAAGGTGCACAAAAAGCAGTCCAGGTAGCAGCTCAGTGCCTTGCCCGCGATCCGAAATCCAGACCTATGATGAGTGAAGTTGTTCAAGCTCTAAAGCCTGTACAGAACCTCAAGGACATGGCCATTGCGTCTCGCCACTTCCAGTTCATTCGAGTTGATCGAACCATGTCTATGCCGAATCCTAAAAACGGCATGCAAACACAAGTAGGATCTTTCTCAAGGAAGGGTCAACCTGTAAGGACCTTGTCAAGTCCAAGAGGTCCTCCTGGTTCTCCATTTCACCATTATAGCAAGTCTCCCAAACCTAATGGATGA 1443 0.4511 MGFENNAIKAGSLDVEKSKGGKKKKKKNRDGDESGCCLRLSFIGSCIPSRSKVDNSISGTTTSAHSYKASAYERSKREASAAPESSTTTSNAGSVPSTPKFSEELKVSPRLRKFTFNELKLATRNFKPESLLGEGGFGCVFKGWIEENGTAPVRPGTGLTVAVKTLNHDGLQGHKEWLAELNILGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRKGSMPLPWSIRMKIALGAAKGLAFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHISTRVMGTYGYAAPEYVMTGHLTTKSDVYSFGVVLLEMLTGRRSIDKNRPNGEHNLVEWARPFILDRRMFYRIIDHRLEGHFSIKGAQKAVQVAAQCLARDPKSRPMMSEVVQALKPVQNLKDMAIASRHFQFIRVDRTMSMPNPKNGMQTQVGSFSRKGQPVRTLSSPRGPPGSPFHHYSKSPKPNG 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03205 480 PANTHER RECEPTOR-LIKE KINASE PLANT 61 472 - -
Aip04g03205 480 PANTHER OS01G0588500 PROTEIN-RELATED 61 472 - -
Aip04g03205 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Aip04g03205 480 SUPERFAMILY Protein kinase-like (PK-like) 100 407 IPR011009 -
Aip04g03205 480 MobiDBLite consensus disorder prediction 81 98 - -
Aip04g03205 480 ProSitePatterns Protein kinases ATP-binding region signature. 132 164 IPR017441 GO:0005524
Aip04g03205 480 MobiDBLite consensus disorder prediction 432 480 - -
Aip04g03205 480 MobiDBLite consensus disorder prediction 1 36 - -
Aip04g03205 480 MobiDBLite consensus disorder prediction 48 69 - -
Aip04g03205 480 ProSiteProfiles Protein kinase domain profile. 126 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03205 480 Gene3D Transferase(Phosphotransferase) domain 1 212 429 - -
Aip04g03205 480 CDD STKc_IRAK 132 409 - -
Aip04g03205 480 Pfam Protein tyrosine and serine/threonine kinase 130 407 IPR001245 GO:0004672|GO:0006468
Aip04g03205 480 MobiDBLite consensus disorder prediction 48 102 - -
Aip04g03205 480 Gene3D Phosphorylase Kinase; domain 1 110 211 - -
Aip04g03205 480 MobiDBLite consensus disorder prediction 435 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03205 Aip-Chr4 126077281 126080967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03205 112 423 Glycoside Hydrolase AT3G07070 55.414 2.21e-115 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip04g03205 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03205 - - aprc:113861691 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02944 10 124938370 124942561 Aip04g03205 04 126077281 126080967 PCT