Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03181 ATGGGAACTGGTGGTGGCGCACCTTCCTCCTCCTCCGCCTCTTCCGGCTGGTCCGGTTTCTGGTCGTCGGCGCTCCGATCAAAGCGCCTCGTCTCTCCGGCGGAGAAGGCGGCCGCTGAAAGCAACGGCCGGGGTCTCTCCCGCCGCCTTGGAGTCCTCGACCTAGTCCTCCTCGGGATCGGTGCTTCCATCGGCGCCGGTATCTTCGTCGTCACCGGCACCGTCGCCCGTGACGCTGGACCCGGAGTAACAATCAGTTTTATACTTGCCGGAGCATCATGTGTTGTAAATGCACTCTGTTATGCCGAGCTAGCTTCTCGTTTCCCTGCTGTTGTCGGAGGAGCGTATCTATACACATACACGGCTTTTAATGAGATCACTGCTTTCCTTGTTTTTGCACAATTAATGCTTGACTATCATATTGGAGCAGCTAGCATAGCAAGAAGCCTGGCAAGCTATGTGGTGTCAATTCTAGAGCTCTTCCCTGTGTTGAAAGATAACATTCCAGACTGGATTGGACATGGTCAGGACATTGGGGAAGTTCTGTCCATCAATGTCTTGGCTCCAATTCTCCTAATTCTTCTCACTCTGATTCTTTGCTGGGGTGTTGGAGAATCATCGGCTGTGAATGCATTCATGACAGTGACCAAGATAGTCATTGTTATAGTTGTCGTTCTTGTTGGAGCTTTTGAGGTTGATGTTTCCAACTGGTCTCCCTTTGCTCCGAATGGCATAAAAAGCATATTTACTGGAGCTACTGTAGTCTTCTTTGCTTATGTTGGATTTGATGCAGTTGCCAATTCTGCCGAAGAATCTAAGAGACCGCAGCGGGATTTGCCAATAGGCATAATTGGAAGCCTCTTAGTTTGTATTGCATTGTATATTGGAGTATGCTTAGTTATTACGGGGATGGTCCCATACATGTATCTTGGAGAAGATGCTCCTTTGGCTGAAGCTTTTACATCTAAAGGATTAAAATTTGTCTCTGTTCTGATTAGTGTTGGTGCCATTGCTGGACTTACAACAACACTCCTTGTTGGTCTCTACGTTCAGTCTCGGTTGTATCTCGGGCTTGGCAGGGATGGTTTACTACCCTCGATATTTGCCAGAGTTAACTCCAAACGGCACACTCCTATTCATTCACAGGTCTGGGTTGGATGTGTTGCCAGTGTTTTGGCTGGACTATTGAACGTAACAATGCTTTCACACATTCTCTCTGTTGGTACACTGACTGGCTATTCAGTTGTCTCGGCATGTGTTGTAGTACTTCGCTGGAAAGATAGGACAAATAGTCAATTATCAACTTCAGCTAAGCAGGAGGGTGTAATTTGCCTCGTTGCTATTGCCGCTTGTGGATTTGCTACTGGGCTCTTATTCCGTTATGATGCCTCACCTATTTTTATGATTCTAGCTATACTTGTTGCAGTAGGTGCTTCTGCTGCTCTTCTTATCCGCCAGGCTTATTCAGATGCGCCAGGATTTTCTTGCCCTGGAGTTCCCCTTCTGCCATGCCTTTGCATCTTTTTTAATATATTCTTATTTGCTCAGTTACATCATGAAGCGTGGGTGAGATTTGTGGTTCTAAGTCTTGTCATGGTTGGTGTTTATGCCATCTATGGCCAGTATCATGCTGATCCCAATGCAGCAGATACCATCATGTATCACCGGGCACCAGAGGATGAAGCTCAATGA 1692 0.4704 MGTGGGAPSSSSASSGWSGFWSSALRSKRLVSPAEKAAAESNGRGLSRRLGVLDLVLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVVNALCYAELASRFPAVVGGAYLYTYTAFNEITAFLVFAQLMLDYHIGAASIARSLASYVVSILELFPVLKDNIPDWIGHGQDIGEVLSINVLAPILLILLTLILCWGVGESSAVNAFMTVTKIVIVIVVVLVGAFEVDVSNWSPFAPNGIKSIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYMYLGEDAPLAEAFTSKGLKFVSVLISVGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFARVNSKRHTPIHSQVWVGCVASVLAGLLNVTMLSHILSVGTLTGYSVVSACVVVLRWKDRTNSQLSTSAKQEGVICLVAIAACGFATGLLFRYDASPIFMILAILVAVGASAALLIRQAYSDAPGFSCPGVPLLPCLCIFFNIFLFAQLHHEAWVRFVVLSLVMVGVYAIYGQYHADPNAADTIMYHRAPEDEAQ 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03181 563 Pfam C-terminus of AA_permease 494 543 IPR029485 -
Aip04g03181 563 Pfam Amino acid permease 50 459 IPR002293 GO:0016020|GO:0022857|GO:0055085
Aip04g03181 563 PIRSF AA_transporter 441 563 - -
Aip04g03181 563 PIRSF AA_transporter 34 494 - -
Aip04g03181 563 Gene3D Amino acid/polyamine transporter I 46 479 - -
Aip04g03181 563 PANTHER CATIONIC AMINO ACID TRANSPORTER 9-RELATED 12 562 - -
Aip04g03181 563 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 12 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03181 Aip-Chr4 125736381 125740503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03181 1 489 Organic Solute Cotransporters AT1G05940 71.313 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03181 K03294 - gmx:100804988 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03181 04 125736381 125740503 Aip04g03181 04 125736381 125740503 ECH
Aip05g02576 05 121969649 121971904 Aip04g03181 04 125736381 125740503 PCT