Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03179 ATGGAACCCTATAAAGGACAAGGCGGCATTCAGATGCTGCTAACTGCTGAACAAGAAGCACAACATATTGTTTCCAATGCAAGAAACTTGAGGAATAAAAGATTGAAGCAGGCAAAAGAAGAGGCTGAGAGGGAGGCAGCACAATATAGAGCTCAAATGGAAGAAGAATACCAAAAGTCAATCTCAGAGACAACTGGGAGCTCTGGATCCAATTGTAATTTCCCAAGAAAAACTGCTGAAGAAAGATAA 249 0.4096 MEPYKGQGGIQMLLTAEQEAQHIVSNARNLRNKRLKQAKEEAEREAAQYRAQMEEEYQKSISETTGSSGSNCNFPRKTAEER 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03179 82 Coils Coil 13 59 - -
Aip04g03179 82 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 8 70 IPR005124 GO:0016471|GO:0046961|GO:1902600
Aip04g03179 82 Pfam Vacuolar (H+)-ATPase G subunit 7 76 IPR005124 GO:0016471|GO:0046961|GO:1902600
Aip04g03179 82 MobiDBLite consensus disorder prediction 58 75 - -
Aip04g03179 82 Gene3D F1F0 ATP synthase subunit B, membrane domain 5 60 - -
Aip04g03179 82 MobiDBLite consensus disorder prediction 35 82 - -
Aip04g03179 82 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 73 IPR005124 GO:0016471|GO:0046961|GO:1902600
Aip04g03179 82 PANTHER V-TYPE PROTON ATPASE SUBUNIT G3 1 73 - -
Aip04g03179 82 MobiDBLite consensus disorder prediction 35 52 - -
Aip04g03179 82 SUPERFAMILY F1F0 ATP synthase subunit B, membrane domain 11 59 IPR028987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03179 Aip-Chr4 125668988 125670335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03179 1 62 Primary Pumps ATPases(2) AT4G25950 61.290 2.46e-21 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03179 K02152 - gmx:100818549 102.834