Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03152 ATGCCACCACCGCCACGACCTTTTTCTCCTGCCCCTCCGCCTCCTCAAACTCCCCTGCCGACGAAACCTTCCTCTAAACCAACCCAGGTACTGCATTTTCCTCCTCCAACTTCAACTCCAGTATCATCTTTTTCGTCAAGCGGCCTCATCGTTGGAATGGCGGCAGCAGTCACTTTCGCCATTTTGATTGTGGTACTTAGCGCTTTTGGCATTTTTTATTGGAAGAATAGAAAGAGAGAACATGATAAGGGGCTCAGACTTAAAGGCAATAACGGAATAATAGAAATCTCCTCAAAGAACAGAATATTCAGATACGAGGAGTTGGAAGTTGCAACAGATGGATTCTCCAAAGCAAATTTGCTTGGAGAAGGTGGATTTGGTTATGTCCACAAAGGAGTTCTTCCAAACGGCAAGGAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTCCAAGCTGAAGTAGACATAATCACTAGGATTCATCACAGGAATCTCGTTTCTTTGCTTGGATATTGCATCGCCGGCCACCATAGACTTCTCGTCTACAAATTTGTTCCAAACAATACATTAGAGTTCCATCTACATGATTGGCCTACAAGAATGAGGATTGCTCTAGGAGCTGCTAAGGGATTAGCATATCTTCATGAGGAATGTTATCCCAAGATCATCCATCGTGATATCAAAGCTGCTAACATTCTCCTCGATTTTAATTTCCAAGCGAAGGTTGCTGATTTTGGGCTTGCAAAGTTTTGCCCAGATATGAATACGCACGTGTCCACTCGAGTGATGGGAACTCTAGGGTATGTGGCCCCTGAATATGCTTCCAGTGGAAACCTCACTGAAAAAGCCGACGTTTTCTCCTTTGGAGTCATGCTTCTTGAGTTAATTACTGGCCGCCGACCAATAATTAATTCACATCATACTTTCATGGAGGTTAGTTTGGCAATGCCTTTGCTAACAAAGGTTTTGAAAGAGAATAATTTTGAAGTTGTAGCTGACCAAAAGCTCCAAAATCAGTATGAACCAACCGAAATGGTTTCCATGCTGGCTTCTGCAGCTGCTTCTATACGATATGAAGCAAAGCTTCGACCAAAGATGAGCCAGATAGTTCGTGCTTTGGAAGGAGATGCATCTCAAGTAGCTGAGTTCACTTCTAATGTATTATGCTTAGATTCCGAGGCTGCTAGATACCGACGAGAAATGATCAAAATCATTAGTGACATGAGTGGATCCACGAGTTAA 1260 0.4365 MPPPPRPFSPAPPPPQTPLPTKPSSKPTQVLHFPPPTSTPVSSFSSSGLIVGMAAAVTFAILIVVLSAFGIFYWKNRKREHDKGLRLKGNNGIIEISSKNRIFRYEELEVATDGFSKANLLGEGGFGYVHKGVLPNGKEAAIKQLKDGSRQGEREFQAEVDIITRIHHRNLVSLLGYCIAGHHRLLVYKFVPNNTLEFHLHDWPTRMRIALGAAKGLAYLHEECYPKIIHRDIKAANILLDFNFQAKVADFGLAKFCPDMNTHVSTRVMGTLGYVAPEYASSGNLTEKADVFSFGVMLLELITGRRPIINSHHTFMEVSLAMPLLTKVLKENNFEVVADQKLQNQYEPTEMVSMLASAAASIRYEAKLRPKMSQIVRALEGDASQVAEFTSNVLCLDSEAARYRREMIKIISDMSGSTS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03152 419 MobiDBLite consensus disorder prediction 1 37 - -
Aip04g03152 419 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 96 384 - -
Aip04g03152 419 MobiDBLite consensus disorder prediction 1 22 - -
Aip04g03152 419 Pfam Protein kinase domain 116 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03152 419 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Aip04g03152 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Aip04g03152 419 CDD STKc_IRAK 121 381 - -
Aip04g03152 419 SUPERFAMILY Protein kinase-like (PK-like) 93 379 IPR011009 -
Aip04g03152 419 ProSiteProfiles Protein kinase domain profile. 115 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03152 419 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 96 384 - -
Aip04g03152 419 Gene3D Transferase(Phosphotransferase) domain 1 191 393 - -
Aip04g03152 419 SMART serkin_6 115 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03152 419 Gene3D Phosphorylase Kinase; domain 1 78 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03152 Aip-Chr4 125243627 125250258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03152 84 399 Trihelix Transcription Factor Family AT4G32710 59.819 1.41e-124 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Aip04g03152 Pkinase 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03152 - - ahf:112743291 764.992