Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03135 ATGCCACCCATGTCCCAACAACTTGTCTTCATATTCCTTTGTGTCCTTATTGTAAAACTCTCTTGGGTTGCAAGTGAAAAGAGTGAAGCAAATGCACTCTTAAAGTGGAAGGCTAGCCTGGAGAACCAAAGCCAAGTTCCCTTATCATCTTGGAAGAATGGGACAAGCCCATGCAGATGGAGAGGAATTCAATGTGATAGATCCAATTCCGTAACCGCCATCAATCTTGAAAATTATCTTCTCAAAGGTACACTCCACGCTCTAGACTTTTCCTCACTCCCCAACCTCCTCACCTTTAACATCTACAACAACTTATTTCATGGAACCATTCCCCCACAAATCGGTAACATGTCCAAAATCAATCGTTTGAACTTCTCTTTGAATCCTTTTGATGGTTCCATCCCTCAAGAGATGTGGACACTGAGAAGCATACGCTGGCTTGATCTTTCCTTCTGTAATTATCTAACAGGACCCATCCCTTCTTCCATTGCAAATTTGATAAACTTATCATATCTAGATTTAGGAGGCAACAATCTCTCCTGCTCCATTCCTCCTACAATTGGCAAACTGAACAACCTTGCCTTTTTTTCTATTGAGTCTAGTAAGATTCGAGGTTCCATTCCCCATGAAATCGGAATGTTGTCAAATCTAGAGTATCTTGATTTCATAGGAAACGATCTCACTGGCAATATCCCTTCTACAATTGCTAATATGAGCAAGTTAAATCAACTTTTACTATCTAACAACACCCTCTCTGGCCCAATCCCACCCTTCCTATGGAACATGTCTAACCTCACCTACCTGTTCCTTGAATCCAATAACTTTTCTGGAAACATCCCTACCACAATAGGAAACTTGGTCAATTTGGAGTCCTTTAATGTGGAGATGAATCAACTTTCTGGATCCATTCCTTCCATAATTGGAAACATGACAAATCTTGTTCAGATTACTCTCGACTTCAACAATTTTGAAGGACACATTCCTGCCTCTGTTGGTAATTTGATCAACTTGGAAACCTTAAGTCTCCAAGGAAACCTTCTCTCAGGAACTATTCCTGACACAATTGGAAACTTGAAACGGCTCTCCATGTTACAATTGTCATCCAACATGCTCAGGGGCAACATTCCGCAAGCCGTTAATAATCTTACCAACATGAATGACTTTTTTGTAGGCAATAATTATCTCATTGGCCACTTGCCGCCTCAAATCTGCTTAGGTGGTTCACTAGCATCCTTCAGTGCTCAAAACAACCGTTTCACTGGTCCAGTACCAAGCAGCTTGAAGAACTGCTCTAGTATTGTCTACATAACTTTACAGGATAACCATTTGGAAGGTGACATATCACAAGACTTTGGTGTTTATCCAAATTTGAATTACATTGATCTAAGTAACAACAAATTTCATGGCCAAATTTCATCAAGCTGGGGCAAGTGCAATAGTCTTCAAGTCTTGATCATTGCCAAAAATAATATTTCCGGTGGTATATCGCCACAAATTGCTGAGGCTACCAAGCTGGGCAGGCTTCATCTTTTTTCAAACCAATTGAGCGGAAATATTCCAAAAGAACTGGGGAATATGACAAACTTGTTTGAACTCAGGATCGACAACAATCATCTTTCTGGAAATATTCCACCCGAAATAGGATTGTTGCAAGGTCTCAGTCACTTGAACCTAGCAGGAAATGAGTTGAGTGGCAACATACCGAGACAAGTTGTTCAGTTATCTAACTTGTTGGAATTGAACTTGAGCAACAACAAATTAGAAGGAAGTATCCCCTCTGACTTCAAGTCATTGGAAACTCTCAATTCTCTTGATCTTAGTGGGAATTTGTTGAATGGTACAATACCAAGAGTGCTTGGAGAATTGAAGAACTTGCAGTGGTTGAATCTCTCTCGCAACAATCTTTCTGGCACAATTCCATCTAGTTTTAATGGCATGTCAAGCTTAGCTTTTGTCAACATATCATACAACCAGTTAGATGGGCCTCTTCCAAATAACAGAGCCTTTCTTCATGCTTCAATTGAATCATTGATAAATAACAAAGGCTTGTGTGGTAATGTCACTGGCTTGGTGCCATGCCCAAGCAGTCCTAGCGGTAAAAGTCACAAGGTCAAGTTATTGGTTCTGCTTCTTATCTTTGGAGTATTAGCACTAGCACTTTGTGTGATTGGTGTTTCAGTATATATTCTTTGTAGAAAAGCAAGAAAGAAAGAAGCCCCGGCCAAAGAAATGCAACCAGAAGAACAATTTTCCATATGGAGTCATGATGGAAAAATGGCATTTGAAACCATCATTAAAGCTACCAATAATTTTGATGACAAATATCTCATTGGAATTGGAGGGCAAGGATCCGTTTACAAGGCTGAGTTGCCTTCTATGGTTGTTGCTGTGAAAAAACTTCACATGGAATCAGATGCGGAGGATAAGTTGAATTGGAAGGCATTTGAAAATGAGATCCAAGCATTGACAGAAATCAGGCACCGAAACATCATAAAGCTGTATGGTTTTTGCCAGCATTCACGATTCTTCTTTTTGGTATACAAGTACCTGGAGGGTGGCAGTTTGAATCATGTACTAGGTGATGAAAAGCTAGCAACTGCATTTGACTGGGAAAGGCGGGTGAATGTGGTTAAAGGAGTTGCTAATGCTCTGTCATATATGCATCATGGTTGCAATCCCCCTATAGTTCATCGTGACATATCAAGCAAGAATATTCTTTTGGATTCAGACTATGAAGCTCATGTCTCTGATTTTGGGACAGCTAAGTTTCTACAGCCTGGTTCAAATTGGACAACACTTGCAGTAGTCACCTATGGCTATGGTGCTCCAGAGCTTGTTCAAACTATGGAAGTGACCGAAAAATGTGATGTATATAGCTTTGGAGTGCTTTGTTTCGAAATCTTTATGGGAAAGCATCCGGCAGATATGATCAATTCACTGTTGTCGCCATCAACAGCATCAATAACATACAATTTGCTATTGGTTGATGTAATTGATCAAAGGCCTCCTCATCCTGAGAAGTCAGTTGTTGGGGAAATCATGCTGATCACAAAGTGGGCGCTTGAGTGTTTGAGCCAAAGTCCACAATTTCGGCCAACCATGCATCAAGTGTCTAAAGAACTCATGATGGGAAAATCACCTTTCTCTGGTGACCACTTTCCCATGATCAGACTTGGACAACTCAACGAAGAATTATTGGAAACCCCACTTTTGTGA 3216 0.4042 MPPMSQQLVFIFLCVLIVKLSWVASEKSEANALLKWKASLENQSQVPLSSWKNGTSPCRWRGIQCDRSNSVTAINLENYLLKGTLHALDFSSLPNLLTFNIYNNLFHGTIPPQIGNMSKINRLNFSLNPFDGSIPQEMWTLRSIRWLDLSFCNYLTGPIPSSIANLINLSYLDLGGNNLSCSIPPTIGKLNNLAFFSIESSKIRGSIPHEIGMLSNLEYLDFIGNDLTGNIPSTIANMSKLNQLLLSNNTLSGPIPPFLWNMSNLTYLFLESNNFSGNIPTTIGNLVNLESFNVEMNQLSGSIPSIIGNMTNLVQITLDFNNFEGHIPASVGNLINLETLSLQGNLLSGTIPDTIGNLKRLSMLQLSSNMLRGNIPQAVNNLTNMNDFFVGNNYLIGHLPPQICLGGSLASFSAQNNRFTGPVPSSLKNCSSIVYITLQDNHLEGDISQDFGVYPNLNYIDLSNNKFHGQISSSWGKCNSLQVLIIAKNNISGGISPQIAEATKLGRLHLFSNQLSGNIPKELGNMTNLFELRIDNNHLSGNIPPEIGLLQGLSHLNLAGNELSGNIPRQVVQLSNLLELNLSNNKLEGSIPSDFKSLETLNSLDLSGNLLNGTIPRVLGELKNLQWLNLSRNNLSGTIPSSFNGMSSLAFVNISYNQLDGPLPNNRAFLHASIESLINNKGLCGNVTGLVPCPSSPSGKSHKVKLLVLLLIFGVLALALCVIGVSVYILCRKARKKEAPAKEMQPEEQFSIWSHDGKMAFETIIKATNNFDDKYLIGIGGQGSVYKAELPSMVVAVKKLHMESDAEDKLNWKAFENEIQALTEIRHRNIIKLYGFCQHSRFFFLVYKYLEGGSLNHVLGDEKLATAFDWERRVNVVKGVANALSYMHHGCNPPIVHRDISSKNILLDSDYEAHVSDFGTAKFLQPGSNWTTLAVVTYGYGAPELVQTMEVTEKCDVYSFGVLCFEIFMGKHPADMINSLLSPSTASITYNLLLVDVIDQRPPHPEKSVVGEIMLITKWALECLSQSPQFRPTMHQVSKELMMGKSPFSGDHFPMIRLGQLNEELLETPLL 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03135 1071 SUPERFAMILY RNI-like 255 673 - -
Aip04g03135 1071 ProSiteProfiles Protein kinase domain profile. 771 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03135 1071 Pfam Leucine rich repeat 601 659 IPR001611 GO:0005515
Aip04g03135 1071 Pfam Leucine rich repeat 312 371 IPR001611 GO:0005515
Aip04g03135 1071 ProSitePatterns Tyrosine protein kinases specific active-site signature. 895 907 IPR008266 GO:0004672|GO:0006468
Aip04g03135 1071 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Aip04g03135 1071 SMART LRR_typ_2 622 645 IPR003591 -
Aip04g03135 1071 SMART LRR_typ_2 574 597 IPR003591 -
Aip04g03135 1071 SMART LRR_typ_2 262 286 IPR003591 -
Aip04g03135 1071 SMART LRR_typ_2 334 358 IPR003591 -
Aip04g03135 1071 SMART LRR_typ_2 93 117 IPR003591 -
Aip04g03135 1071 SMART LRR_typ_2 526 550 IPR003591 -
Aip04g03135 1071 SMART LRR_typ_2 214 238 IPR003591 -
Aip04g03135 1071 SMART LRR_typ_2 166 190 IPR003591 -
Aip04g03135 1071 Gene3D Ribonuclease Inhibitor 314 385 IPR032675 -
Aip04g03135 1071 Gene3D Phosphorylase Kinase; domain 1 731 849 - -
Aip04g03135 1071 Gene3D Transferase(Phosphotransferase) domain 1 850 1049 - -
Aip04g03135 1071 Gene3D Ribonuclease Inhibitor 238 313 IPR032675 -
Aip04g03135 1071 Gene3D Ribonuclease Inhibitor 86 237 IPR032675 -
Aip04g03135 1071 Gene3D Ribonuclease Inhibitor 387 695 IPR032675 -
Aip04g03135 1071 Gene3D Ribonuclease Inhibitor 21 85 IPR032675 -
Aip04g03135 1071 SUPERFAMILY L domain-like 51 299 - -
Aip04g03135 1071 ProSiteProfiles Leucine-rich repeat profile. 576 598 IPR001611 GO:0005515
Aip04g03135 1071 SUPERFAMILY Protein kinase-like (PK-like) 751 1041 IPR011009 -
Aip04g03135 1071 Pfam Protein kinase domain 773 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03135 1071 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 153 249 - -
Aip04g03135 1071 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 8 168 - -
Aip04g03135 1071 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 242 1061 - -
Aip04g03135 1071 PANTHER LRR RECEPTOR-LIKE KINASE 8 168 - -
Aip04g03135 1071 PANTHER LRR RECEPTOR-LIKE KINASE 242 1061 - -
Aip04g03135 1071 PANTHER LRR RECEPTOR-LIKE KINASE 153 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03135 Aip-Chr4 124912784 124916089 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03135 3 943 Receptor kinase-like Gene Family AT4G08850 42.602 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip04g03135 Pkinase 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03135 - - aip:107635237 1399.8