Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03127 ATGAGCTGTTCTAATATTTTCATTCCCCTTCTTGTTTCATCGTTTCTTCTTTTCACTTTCTTGCCGGGAGCTGCCCATGGCAGCAAAAAGTGCTACATTGTGTACTTGGGAGCACATTCTCATGGTCCAACCCCTACCTCTTTTGACTTGGAAACCGCCACATATTCTCATTATGATTTGCTAGGTTCAGTTTTGGGAAGCCATGAGAAAGCGAAAGAGGCCATGATATACTCATACAATAAGCACATCAATGGCTTTGCTGCTTTACTTGACGAGGAAGAAGCAGCAATCGTTGCAGAAAACCCAAATGTGGTTTCTGTGTTCTTGACCAAAAAGCACAAATTGCACACGACACGGTCGTGGGAATTTCTTGGACTACACAGAAATGATAAGAACTCAGCTTGGCCAAAGGGAAGATTTGGTGAAAATACAATAATCGCTAACATTGATACAGGCGTTTGGCCAGAATCCACGAGTTTCGATGACAAGGGATATGGCCCAATCCCGTCAAAATGGCGCGGGGGTAACGTCTGTCAAATAAACGAATTCCAAAGTTCTAGGAAAAATCCTTGCAACAGGAAGTTGATTGGAGCAAGATTTTTCAACGTAGCTTTTGAGACATACTATGGGAAACTTGACGGGAAGTTACAGACAGCTCGTGACTTTGTAGGGCACGGGACACACACTTTATCGACAGCAGGTGGCAACTTCGTGGCAGGAGCAAGCGTATTCGCGGTTGGGAATGGCACAGCTAAGGGTGGCTCTCCAAGAGCCAGGGTTGCAGCCTACAAAGTCTGTTGGTCTCTAACGGATCCATCTGATTGCTTTGGGGCCGATATCTTGTCCGCAATCGACCAAGCCATAAACGACGGTGTTGATATCATCTCCGTCTCCATCGGCGACCAATATTTAGTGCACCCTGAAGATATATTCACCGATGAGATATCCATTGGCTCATTCCATGCTATTTCTAACAACATATTGTTCGTTGCCTCTGCTGGAAATGACGGACCAACACCTGGAACCGTCGCTAATGTGGCTCCCTGGATATTCACGGTTGCTGCTAGCACAACAGATAGGAACTTTAGTAGTACCATTACTTTTGGTAACGGTCGACAAATCACCGGAGCCAGTTTATTCACAAGCTTGCCACCTAACCAGGCCTTTCCTGTGATCCTTGCTGCTGATGGTAAACTTGCCAATGCCACAACTCGAGATGCTTCCCTTTGTAGACGAGGAACACTTGACCCAGCAAAAGTCAAGGGAACAATAGTGGACTGCCTCAGGGAAGGAAAAATAAAATCAGTTTCGGAGGGTTTGGAAGCTCTGAAAGCAGGTGCCAGAGCAATACTCATGGAAAATCAAAAGCAAAATGGGGGAACAACTCTTGCTGAGCCTCACATTATGTCGTGTGTGAATTATCCAAATGTCCACCCTCCTCCTATACCACCACACCCACATCATAATATCACTGCTACCACTGATATTAATAAAATAACGGCGTCTACAACAATAAAGATCTCCCCAGTAAAAACATTCTTTGGAATAAAACCCGCTCCAGTTATGGCTTCATTCTCCTCTAGAGGGCCCAATCAGATTCAGCCATCAATACTCAAGCCTGATATTACAGCACCAGGAACAAACATACTTGCTGCCTACTCACTATTCGCTAGTGCGTCTGACCTACTAGTAGATGGTCGTCGAGGGTTTCGATTCAATGTGCTACAAGGAACATCTATGGCTTGCCCTCATATCTCTGGAATTGCCGGACTTCTCAAAACTCTTCATCCTCATTGGAGTCCCGCCGCTATTAAGTCTGCAATCATGACCACCGCAACCACACTAGACAACTCAAACGGCCCTATCAAAGATGCATTTGATGATAAGCTAGCAAATTCTTTTGCTTATGGGTCAGGACATGTTCGACCAAACCTTGCAATAGATCCAGGACTTGTTTATGATCTGCACCTTGACGATTATTTGAACTTCTTATGTGCTTCTGGATACAATCAACAAGCCATTTCAGCACTTAATTTCAACAGGACTTTCACTTGCAAAGGAAATCACAGCATAGACGACTTGAATTATCCTTCAATCACATTGCCAAATCTAAAGTTGAGTCCAGAAACTGTTACTCGTACACTCACCAATGTGGGTCCCCCAGGCACATATAACGTTACTGCCAAAGTGGACGGATGCAAAATTGCTGTTGTGCCCAATTCCTTGACTTTTACTAAATTAAATGAAAAGAAGACCTTCAAGGTTACTGTGCAAGCATCAAGTGTGATTCAGAGTTATAAATATCAATTTGGTGAATTGATATGGACAGATGGAAAGCACAGAGTCAGGAGTCCTATTACAATCCGACGCCGCAAATGA 2379 0.4422 MSCSNIFIPLLVSSFLLFTFLPGAAHGSKKCYIVYLGAHSHGPTPTSFDLETATYSHYDLLGSVLGSHEKAKEAMIYSYNKHINGFAALLDEEEAAIVAENPNVVSVFLTKKHKLHTTRSWEFLGLHRNDKNSAWPKGRFGENTIIANIDTGVWPESTSFDDKGYGPIPSKWRGGNVCQINEFQSSRKNPCNRKLIGARFFNVAFETYYGKLDGKLQTARDFVGHGTHTLSTAGGNFVAGASVFAVGNGTAKGGSPRARVAAYKVCWSLTDPSDCFGADILSAIDQAINDGVDIISVSIGDQYLVHPEDIFTDEISIGSFHAISNNILFVASAGNDGPTPGTVANVAPWIFTVAASTTDRNFSSTITFGNGRQITGASLFTSLPPNQAFPVILAADGKLANATTRDASLCRRGTLDPAKVKGTIVDCLREGKIKSVSEGLEALKAGARAILMENQKQNGGTTLAEPHIMSCVNYPNVHPPPIPPHPHHNITATTDINKITASTTIKISPVKTFFGIKPAPVMASFSSRGPNQIQPSILKPDITAPGTNILAAYSLFASASDLLVDGRRGFRFNVLQGTSMACPHISGIAGLLKTLHPHWSPAAIKSAIMTTATTLDNSNGPIKDAFDDKLANSFAYGSGHVRPNLAIDPGLVYDLHLDDYLNFLCASGYNQQAISALNFNRTFTCKGNHSIDDLNYPSITLPNLKLSPETVTRTLTNVGPPGTYNVTAKVDGCKIAVVPNSLTFTKLNEKKTFKVTVQASSVIQSYKYQFGELIWTDGKHRVRSPITIRRRK 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03127 792 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 789 - -
Aip04g03127 792 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 789 IPR045051 -
Aip04g03127 792 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Aip04g03127 792 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Aip04g03127 792 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Aip04g03127 792 PRINTS Subtilisin serine protease family (S8) signature 576 592 IPR015500 -
Aip04g03127 792 Gene3D - 664 791 - -
Aip04g03127 792 Pfam Subtilase family 141 619 IPR000209 GO:0006508|GO:0008236
Aip04g03127 792 CDD Peptidases_S8_3 113 613 IPR034197 -
Aip04g03127 792 CDD PA_subtilisin_like 365 472 - -
Aip04g03127 792 Gene3D - 359 514 - -
Aip04g03127 792 Pfam Fibronectin type-III domain 693 788 IPR041469 -
Aip04g03127 792 Gene3D Peptidase S8/S53 domain 144 660 IPR036852 GO:0004252|GO:0006508
Aip04g03127 792 Pfam Peptidase inhibitor I9 32 115 IPR010259 -
Aip04g03127 792 ProSitePatterns Serine proteases, subtilase family, serine active site. 577 587 IPR023828 -
Aip04g03127 792 SUPERFAMILY Subtilisin-like 115 651 IPR036852 GO:0004252|GO:0006508
Aip04g03127 792 ProSiteProfiles Serine proteases, subtilase domain profile. 120 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03127 Aip-Chr4 124763381 124768841 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03127 32 789 Subtilisin-like Serine Gene Family AT2G04160 51.178 0.0 737