Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03122 ATGTATCCAAAGATTGAAGGTAGCACATACAGCAGGGGCATTATGCTCATGTACCTGTGTGTACATCTTGTTGCTGCTGCTTCAAGTGAGAACAGTGAAGCAAGTGCACTCTTAAAGTGGAAGGCCAGCCTTGAGAACACCAGTGTGTTGTCGTCGTGGGCAGGTACGAATCCATGCAAATGGCACGGCATTGCATGCGACAGAGCCAATTCCGTTACGGCAATAAATCTTGAAAATCATAATCTGAAAGGTACACTCCACACTCTCAGCTTCTCATCATTCCCCAACCTCCTCACCTTTAATATCTACAACAACTTCTTCTATGGAACCATACCACCACACATTGGTAACATATCCAAACTCAATACTTTGAACTTGTCTTTGAACGCTTTTGAGGGTACCATCCCTAAGGAGATGTGGACATTGACGAGTTTACACGGGCTTGATCTTTCCCTGTGTATTTATCTTAGTGGAGCGATACCCAGTTCCATAGCAAATTTGACCAACCTATCATACCTAGATGTAGCCCAGAACAATCTTTCTGGCCACATTCCTCCTGAGATTGGAAATTTGAACAGCCTCAAGTATCTTGATCTAGCAGGTAATAAGCTTAGTGGTTCCATTCCCCACGAAATTGGAATGTTGACAAAGCTTGAGGTACTTGTTTTATCAACAAACTTTCTCTTTGGAACTATCCCTTCTACCATTGGTAACCTTAGCAATCTGATTCACTTTTTTGTTTCAAATAACTCCCTCTCTGGCCCAATCCCATCCCTCATATGGAACATGTCTAACTTGTCCTGGCTATACCTTGATGGCAATCGACTATCTGGATCAATCCCTCCTTCCTTAGAAAACTTGGCCAATTTGGAACGCTTTGTACTTCATGGAAACAATCTTTCTGGGTCCATTCCTTCCACTGTTGGAAACATGACTAAGCTCATCTACTTGTTCATGCGCGTCAATAATTTTTCTGGATCAATTCCTGTCTCCATAGGTAATTTGATCAACTTGAAAAGACTTAGTCTCCAAGAAAACAATTTCTTCGGATTTATTCCCAACACAATTGGAAACTTAAAGAAGCTCTCGCTGCTTGAATTGTCTTTCAACAATCTTAAAGGTAGCATTCCGCCACCCATAAGAAACATGACCAACCTCATGATCTTTTTAGTATCTGAAAATAATTTAACTGGAAATTTGCCTCCCCAAATCTGCTCAGGGGGATCACTAGAGTCATTTTGTGCTGATAATAATCACTTTACCGGTCCAGTACCAAGAAGCTTGAAGAATTGCTCTAGTATTCAAAGAATCAGGCTACAAGGTAACCAATTGGAAGGAGATATAGCACAAGATTTTGGCATATATCCAAATTTGGGATTTATTGATATAAGTGACAATAAATTTCATGGCCAAATTTCTCCTAACTGGGGGAGGTGCCCTAATCTTGATACCTTGATCATATCCAACAATAATATTTCCGGTAGTATACCCCCACAAATTGCAGAGGCAACTAAACTGGGTGTGCTTCAACTTTCTTCAAACCAATTGACTGGAAGGATACCAAAAGAACTAGGGAATTTGAAGAGCCTGCTTCATCTCAAGATAGGCAACAATCAACTTGTAGGAAACATTCCAAAACAAGTTGTAGGGTTGCCTAATTTGTTGGAATTGAACTTGAGCAACAACAGACTAGATGGAAGCATCCCCTCTGAGTTTGATCCAATTCAACCTCTTTATTCTCTTGATCTTAGCGGGAATTTGTTGAATGGAACAATACCGTCGGTGCTTGGACAGCTGAAGCAGTTGCAATTGTTGAACCTCTCACACAATAATCTCTCTGGCACAATTCCAAACACTTTTAGTAGCAGTATGTCAAGCTTGATTTATGTCAACATATCATATAACCAGTTAGAAGGGCCACTTCCAGACAACAACCGAGCCTTTCAGAGTGCTACAATTGAATCATTGAAAAATAACAAAGGCTTATGTGGTAATGTCACTGGCTTGATGCCATGCCCAAGCAGCAGTCCTAGGCACAAAAGTCACAAGGTCATGTTATTGGTATTTCTTGTTATATTTGGAGTACTAGTGCTTTCTGTGGTGGCTGTTTCATTGTACTTTCTTTGTAAAAGTGCTAGAAACAAAGACAACTCAGCTAAAGAAGTGCAACAAGTAGAAGAACACTTTTCCATATGGAGCCATGACGGAAAAATGGCATTTGAAACTATCATTGATGCCACCAATAATTTTGATGACAAATATCTCATTGGAATTGGAGGGCAAGGATCCGTTTACAGGGCTGAGTTGCCTTCAGGTATGGTTGTTGCTGTGAAGAAGCTTCATAAGGAATCAGATGCAGGGAACAAGTCCAATTTGAAAGCATTTGAGAATGAAATCGAAGCACTGACAGAATTGAGGCACCGCAACATCATAAAGCTATACGGATATTGCCAGCATTCACGCTTCTCATTTTTGGTTTATGAGTTCTTGGATGGTGGCAGTTTGGATCAAGCACTTGGCAGTGAAAACCAAGCAACTGCATTTGATTGGGAGAGGAGGGTGAATGTGGTTAAAGGAGTTGCAAACGCTTTGTCATATATGCATCATGATTGCAAACCCCCCATAGTTCACCGTGACATATCAAGCAAGAACATTCTGTTGGACTCAGATCATGAAGCTCATGTCTCTGACTTTGGAACTGCTAAGTTTTTGAACCCAGATTCAAATTGGACAACACTTGCAGTCACCTATGGCTATGGAGCTCCAGAACTAGCTCAGACTATGGAAGTGACAGAGAAATGTGATGTATACAGCTTTGGAGTGCTTTGTTTGGAAATTCTTATGGGAAAGCATCCAGCGGACCTAATAAGTTCATTGTTGTCACCATCAACAGCGAGAATAACATACAATTTGTTATTGGTTGATGTCATAGATCAGAGACCTCCCCTTCCTGAAATATCAATTGTTGGGGAAATAACGTGGATCACAAAGTGGGCACTTGAATGCTTGAGCCAAAGTCCACAATCTCGACCAAGCATGCATCAAGTTTCTAAAGAGCTTATGATGGGAAAACCACGTTTCCCGGGTGACCAATTTGCTATGATCAGAATTGGACAACTCAATGAAGAATGGGAGACTCCACTTATGTGA 3150 0.4095 MYPKIEGSTYSRGIMLMYLCVHLVAAASSENSEASALLKWKASLENTSVLSSWAGTNPCKWHGIACDRANSVTAINLENHNLKGTLHTLSFSSFPNLLTFNIYNNFFYGTIPPHIGNISKLNTLNLSLNAFEGTIPKEMWTLTSLHGLDLSLCIYLSGAIPSSIANLTNLSYLDVAQNNLSGHIPPEIGNLNSLKYLDLAGNKLSGSIPHEIGMLTKLEVLVLSTNFLFGTIPSTIGNLSNLIHFFVSNNSLSGPIPSLIWNMSNLSWLYLDGNRLSGSIPPSLENLANLERFVLHGNNLSGSIPSTVGNMTKLIYLFMRVNNFSGSIPVSIGNLINLKRLSLQENNFFGFIPNTIGNLKKLSLLELSFNNLKGSIPPPIRNMTNLMIFLVSENNLTGNLPPQICSGGSLESFCADNNHFTGPVPRSLKNCSSIQRIRLQGNQLEGDIAQDFGIYPNLGFIDISDNKFHGQISPNWGRCPNLDTLIISNNNISGSIPPQIAEATKLGVLQLSSNQLTGRIPKELGNLKSLLHLKIGNNQLVGNIPKQVVGLPNLLELNLSNNRLDGSIPSEFDPIQPLYSLDLSGNLLNGTIPSVLGQLKQLQLLNLSHNNLSGTIPNTFSSSMSSLIYVNISYNQLEGPLPDNNRAFQSATIESLKNNKGLCGNVTGLMPCPSSSPRHKSHKVMLLVFLVIFGVLVLSVVAVSLYFLCKSARNKDNSAKEVQQVEEHFSIWSHDGKMAFETIIDATNNFDDKYLIGIGGQGSVYRAELPSGMVVAVKKLHKESDAGNKSNLKAFENEIEALTELRHRNIIKLYGYCQHSRFSFLVYEFLDGGSLDQALGSENQATAFDWERRVNVVKGVANALSYMHHDCKPPIVHRDISSKNILLDSDHEAHVSDFGTAKFLNPDSNWTTLAVTYGYGAPELAQTMEVTEKCDVYSFGVLCLEILMGKHPADLISSLLSPSTARITYNLLLVDVIDQRPPLPEISIVGEITWITKWALECLSQSPQSRPSMHQVSKELMMGKPRFPGDQFAMIRIGQLNEEWETPLM 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03122 1049 ProSitePatterns Tyrosine protein kinases specific active-site signature. 875 887 IPR008266 GO:0004672|GO:0006468
Aip04g03122 1049 Gene3D Phosphorylase Kinase; domain 1 709 829 - -
Aip04g03122 1049 Gene3D Ribonuclease Inhibitor 278 379 IPR032675 -
Aip04g03122 1049 Gene3D Ribonuclease Inhibitor 29 182 IPR032675 -
Aip04g03122 1049 ProSiteProfiles Leucine-rich repeat profile. 193 215 IPR001611 GO:0005515
Aip04g03122 1049 PANTHER LRR RECEPTOR-LIKE KINASE 14 170 - -
Aip04g03122 1049 PANTHER LRR RECEPTOR-LIKE KINASE 533 1040 - -
Aip04g03122 1049 PANTHER LRR RECEPTOR-LIKE KINASE 246 546 - -
Aip04g03122 1049 PANTHER LRR RECEPTOR-LIKE KINASE 155 242 - -
Aip04g03122 1049 Pfam Leucine Rich Repeat 337 359 IPR001611 GO:0005515
Aip04g03122 1049 PRINTS Leucine-rich repeat signature 194 207 - -
Aip04g03122 1049 PRINTS Leucine-rich repeat signature 599 612 - -
Aip04g03122 1049 SUPERFAMILY Protein kinase-like (PK-like) 730 1020 IPR011009 -
Aip04g03122 1049 SUPERFAMILY L domain-like 234 633 - -
Aip04g03122 1049 SMART LRR_typ_2 551 574 IPR003591 -
Aip04g03122 1049 SMART LRR_typ_2 287 311 IPR003591 -
Aip04g03122 1049 SMART LRR_typ_2 599 622 IPR003591 -
Aip04g03122 1049 SMART LRR_typ_2 215 239 IPR003591 -
Aip04g03122 1049 SMART LRR_typ_2 263 286 IPR003591 -
Aip04g03122 1049 SMART LRR_typ_2 335 359 IPR003591 -
Aip04g03122 1049 SMART LRR_typ_2 383 407 IPR003591 -
Aip04g03122 1049 SMART LRR_typ_2 167 191 IPR003591 -
Aip04g03122 1049 Pfam Protein kinase domain 752 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03122 1049 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Aip04g03122 1049 Gene3D Transferase(Phosphotransferase) domain 1 830 1026 - -
Aip04g03122 1049 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 155 242 - -
Aip04g03122 1049 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 533 1040 - -
Aip04g03122 1049 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 246 546 - -
Aip04g03122 1049 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 170 - -
Aip04g03122 1049 Gene3D Ribonuclease Inhibitor 380 681 IPR032675 -
Aip04g03122 1049 ProSiteProfiles Protein kinase domain profile. 750 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03122 1049 Gene3D Ribonuclease Inhibitor 183 277 IPR032675 -
Aip04g03122 1049 Pfam Leucine rich repeat 578 637 IPR001611 GO:0005515
Aip04g03122 1049 Pfam Leucine rich repeat 217 276 IPR001611 GO:0005515
Aip04g03122 1049 Pfam Leucine rich repeat 505 564 IPR001611 GO:0005515
Aip04g03122 1049 SUPERFAMILY L domain-like 52 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03122 Aip-Chr4 124589154 124592403 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03122 14 922 Receptor kinase-like Gene Family AT4G08850 42.842 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip04g03122 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03122 - - aip:107635237 2034.61