Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03121 ATGGTGTCTTGTATGATGGGGACATTTGGTTATGTTGCACTGGAGTATGCATGCATTGGAATGCTGACTAAGAAGAGTGATGTTTATAGCTTTGGGATACTTATTATGGAAATAATTACCGGCAGAAGTCCTGTTGATTATAGTAAATCCCAAGGAGAGGTTAATTTAATTGAGTGGTTGAAAGTTATGGTTGGCAATAGAAAATCAGAGGAACTCATTGATCCGAAACTTCCTGAAAAGCCGTCTTCAAAGGCTCTTAAGCTTTGCTCTGTTGGAACGGAGGACTGGAGGAGAATCGTTGCGATCCGTGGCAATTATCATCATGAGCAAAAAGACTCTAGCAGGGATAGAAAGCGAATAGGTGGAAAGATCAATGATCGAAGTGAAGATAATAATAGCAGTAAAAATCTTGTCCATCCCACTAGGTTGAGATGA 435 0.4 MVSCMMGTFGYVALEYACIGMLTKKSDVYSFGILIMEIITGRSPVDYSKSQGEVNLIEWLKVMVGNRKSEELIDPKLPEKPSSKALKLCSVGTEDWRRIVAIRGNYHHEQKDSSRDRKRIGGKINDRSEDNNSSKNLVHPTRLR 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03121 144 PANTHER OS01G0323000 PROTEIN 4 88 - -
Aip04g03121 144 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Aip04g03121 144 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03121 144 SUPERFAMILY Protein kinase-like (PK-like) 3 84 IPR011009 -
Aip04g03121 144 Pfam Protein tyrosine and serine/threonine kinase 10 56 IPR001245 GO:0004672|GO:0006468
Aip04g03121 144 MobiDBLite consensus disorder prediction 107 133 - -
Aip04g03121 144 MobiDBLite consensus disorder prediction 107 144 - -
Aip04g03121 144 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 4 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03121 Aip-Chr4 124585026 124585898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03121 5 92 Receptor kinase-like Gene Family AT4G02010 45.556 1.99e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip04g03121 PK_Tyr_Ser-Thr 8.5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03121 - - aip:107626519 184.496