Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03120 ATGACGATTTCAGGGATAGTTACCACGATCGTCGTTGACATTTCTGGGTACCTCGGTGTAACTGTTGTCAAGGTACACGCCCAGGTAGTAAAGGACGACTCCGTTGATTATCATACAACGATCGCCACCGTACCTTCCGGGGATACCTATGGTGTAGCCTCTTATATAGCAGTCCCACCTGATGTACGACCGGCGGTCGTTCTCTCTCCCTCTACTATAGTTGTGGTAGTGAATACCGAACCAGATAACGGCGGTTTTGCAGGCGTGGGAGCCAGTCTTTTCATAGACTTGCCGCCAAACCAGGCCTTCCGTCTGTTACTCTCTACTGATGGTAAAGTTGCCAATGCGTCCGTTAGAGATGCCCAATTTTGTAGACGAGGAACACTTGATCCAGCAAAAGTGAGGGGCAAAATAGTAGAATGCTATAGAGAAAATAGCATAAAATCAGTGTCTGAGGGTGAGGAAGCTCTAAGAGCTGGTGCAAAGGGAATCATCGTGCGCAACCAAAAGAACCAGGGGAATACAGTTCTTGCTGAGCCCCAGGTTTTCTCAGGTGTGAACACCGAAAGTGGAGAAGTAGGTGGAAGTCCAGATTCAAGACATGTCATAACTGCCACGGGTCCCGTAACGCCTACTACCAGCACAATAAGACTGTCTCCGGCTAAAACAGTCTATGGAAGAAAGCCAGCTCCAGTTATGGCTGCGTTCTCCTCAAGAGGGCCCAATGAAATTCAGCCATCCATACTTAAGCCTGATGTGAGTGCACCTGGAGTGAGCATACTGGCTGCCTATTCTCTATTTGCAAGTGTATCTAACTTATTGACAGACAATCGTCGGGGATTTCCATTCAATGTAATGCAAGGAACTTCTATGTCTTGCCCCCATGTTGCTGGTATTGCTGGACTTCTCAAAACTCGTCATCCAAATTGGAGTCCTGCAGCTATTAAATCAGCAATTATGACTACTGATGCAGATTGGGAATGGAAAAACAAGCACGGTGCAGGGAGGGATGATGGCACATGGGTCGGGCAGGGAGTGTTATTGGGATGGGGCCCAAATGGAGTCATCCAAAAAAAGGTAACTAACTGGGAACAAAACACACAAGGCCCAAATGTTGAGGTCAATGAGGGATTAGAAGTGGGCCTAAGTACTGGGCCTCAGATGGAAATGCATGAAGGCAATGGGAAGGGGGCCTTGCGGGCGGGTCGGGTTGGTGAAAACACGCCCGTGGAACGCTGCTGTGTGGAGAGCAGTAGGGTTGATGGCACTAACGGCGCTACCAGGGTGGGACGCAGAAGGCCGACTTGCGACCTTCGGGCCTCAGCGCCTACGACGGCCAAGGGGGGTTTGAGTGACGGGCCGATGGTGGTGACGAATGGTGACGCAGTGGTGGGTTTGGCGGAAGGGGAACCGGTGCCGGGCAGGACTCGGTCTGATGGCGGTGGGGCTAGGATGGACTCGCGGGGTCTGGCAACGGATCCTTTGGCCAGGACGAGTAGAAGGGTGGGGCTCGGGGCCGCCCAGCCTGGAAGGAGAAACGGCGTCGGGGGTGGCTGCTGGTGGCGCGGGGAACCCAAACCGGGGGGAGAGGCTTGTGGGAAGGCTGATGCCACAGGGGACTCCAAGGGGGCAGTAGATCCAGCATCGGGGACTGCAGGGAATCACTGGGTGGAATTGACGAATGAAATTTCTGTGGCTGGGAATGAAGCCATACAAGACATGTCTGATAATAATAGAAGggaagctgaaatgatggaaaaccgggaagcttggaagcttgctgtggaatctggagccgagcagtatgatgaggaagatgacatcatggcaatactccaggctcagaacgaggcactggcggagaagaaaagGCCGATTCGAGATGCATCTGATGAGAAGCTAGCAACACCCTTTGCTTATGGTTCTGGACATGTTCAACCCAATCTTGCAATAGAGCCAGGACTTGTTTACGATCTACACCTCAATGATTATCTGAACTTCTTATGTGCATCTGGATACGATCAACAACTCATTTCAGCACTAAATTTCGACAGAACATTCACTTGTAAAGGAACTCACAGCATAAATGATTTGAACTACCCTTCAATCACGTTGCCAAATTTAAGGTTGAGTCCAATAACAGTTACTCGTACACTCACCAACGTAGGTCCCCCGGGCACATATAATGCAACTGCCAAACTGGATGGATGCGAAATTACTGTTGTGCCCAATTCCCTCACTTTCATTAAATTAAATGAACAGAAGACATTCCAAGTTACTCTACAGGCATCGAGTGTAATTCATCAATATAACTATCAGTTCGGAGAATTGCTATGGACAGATGGAAAACACACAGGCTTTTGCCCTTCTGCATCCCATCAACGTCGCTCGTTCCTTGGTCCTCCCCTCCGCGGTAGCTCGCTCTCTGATCCTCTCTCTGCGTCGTGGTCGTTCTCTAATCCTCTCCATTCGCGGGATTGCTCGTTCTCCCCTGTATCGTGTTTGTTCTCTGATTGTCGACGTCGCAACAAGCTGCCGCCGCCGCCGCTACACTCGGGTCCACCACTTCATTATTTTCTGTCGCCTGCCTCTCTGTTCCTCTTCTTCACCAGCGACTATGATCTCTATCCTTCTCCCTCCACCTTTTCCTCTGCGACCTATTAA 2664 0.4801 MTISGIVTTIVVDISGYLGVTVVKVHAQVVKDDSVDYHTTIATVPSGDTYGVASYIAVPPDVRPAVVLSPSTIVVVVNTEPDNGGFAGVGASLFIDLPPNQAFRLLLSTDGKVANASVRDAQFCRRGTLDPAKVRGKIVECYRENSIKSVSEGEEALRAGAKGIIVRNQKNQGNTVLAEPQVFSGVNTESGEVGGSPDSRHVITATGPVTPTTSTIRLSPAKTVYGRKPAPVMAAFSSRGPNEIQPSILKPDVSAPGVSILAAYSLFASVSNLLTDNRRGFPFNVMQGTSMSCPHVAGIAGLLKTRHPNWSPAAIKSAIMTTDADWEWKNKHGAGRDDGTWVGQGVLLGWGPNGVIQKKVTNWEQNTQGPNVEVNEGLEVGLSTGPQMEMHEGNGKGALRAGRVGENTPVERCCVESSRVDGTNGATRVGRRRPTCDLRASAPTTAKGGLSDGPMVVTNGDAVVGLAEGEPVPGRTRSDGGGARMDSRGLATDPLARTSRRVGLGAAQPGRRNGVGGGCWWRGEPKPGGEACGKADATGDSKGAVDPASGTAGNHWVELTNEISVAGNEAIQDMSDNNRREAEMMENREAWKLAVESGAEQYDEEDDIMAILQAQNEALAEKKRPIRDASDEKLATPFAYGSGHVQPNLAIEPGLVYDLHLNDYLNFLCASGYDQQLISALNFDRTFTCKGTHSINDLNYPSITLPNLRLSPITVTRTLTNVGPPGTYNATAKLDGCEITVVPNSLTFIKLNEQKTFQVTLQASSVIHQYNYQFGELLWTDGKHTGFCPSASHQRRSFLGPPLRGSSLSDPLSASWSFSNPLHSRDCSFSPVSCLFSDCRRRNKLPPPPLHSGPPLHYFLSPASLFLFFTSDYDLYPSPSTFSSATY 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03120 887 ProSitePatterns Serine proteases, subtilase family, serine active site. 288 298 IPR023828 -
Aip04g03120 887 CDD PA_subtilisin_like 85 192 - -
Aip04g03120 887 PANTHER SUBTILISIN-LIKE PROTEASE GLYMA18G48580 627 785 - -
Aip04g03120 887 ProSiteProfiles Serine proteases, subtilase domain profile. 1 343 - -
Aip04g03120 887 Coils Coil 602 622 - -
Aip04g03120 887 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 89 326 IPR045051 -
Aip04g03120 887 SUPERFAMILY Subtilisin-like 233 345 IPR036852 GO:0004252|GO:0006508
Aip04g03120 887 Gene3D - 668 793 - -
Aip04g03120 887 Pfam Subtilase family 205 335 IPR000209 GO:0006508|GO:0008236
Aip04g03120 887 Gene3D - 98 225 - -
Aip04g03120 887 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 627 785 IPR045051 -
Aip04g03120 887 Gene3D Peptidase S8/S53 domain 226 327 IPR036852 GO:0004252|GO:0006508
Aip04g03120 887 Gene3D Peptidase S8/S53 domain 631 664 IPR036852 GO:0004252|GO:0006508
Aip04g03120 887 PANTHER SUBTILISIN-LIKE PROTEASE GLYMA18G48580 89 326 - -
Aip04g03120 887 MobiDBLite consensus disorder prediction 528 552 - -
Aip04g03120 887 MobiDBLite consensus disorder prediction 466 489 - -
Aip04g03120 887 MobiDBLite consensus disorder prediction 187 212 - -
Aip04g03120 887 Pfam Fibronectin type-III domain 697 785 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03120 Aip-Chr4 124568694 124584729 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03120 625 784 Subtilisin-like Serine Gene Family AT2G04160 51.829 2.50e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03120 - - aip:107637208 455.677