LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip04g03118	ATGGGCAACTTCAGGTTTATAGTTTCAACATTTCTTCTTTTCGTTCTCTTGCCGGAAGCTGTTCATGGCAGCAAAAAGTGCTACATTGTATACTTGGGAGCACATACTCATGGTCCAAGCCCCACTTCAGTAGACTTTGAAGCTGCCACATATTCTCATTACGATTTGCTATCTTCAGTTCTCGAAAGCCATGAGAAAGCCAAAGAAGCCATGGTATACTCGTATAATAAACACATCAATGGCTTTGCCGCGATGCTTGAGAAGGAAGAAGCAGCACATATTGCAAAAAACCCGAGTGTGGTGTCTGTGTTCTTGAGCAAAGAGCACAAATTGCATACGACCCGGTCGTGGGAATTTCTGGGACTAAACAGAAATGGAGGGAACTCAGCATGGCAAAAGGGAAGATTCGGTGAAAATACAATCATTGCTAACATTGACACAGGAGTTTGGCCGGAATCGAGGAGTTTCAGTGACAAGGGATATGGCCCCGTTCCACCAAAATGGCGTGGAGAAAATGTGTGTGAGATAAGCAAAGTTGGCGGTTCCCGAAAAAATGTTTGCAACAGGAAGCTAATTGGAGCAAGATTCTTTGCCGATGGTTTTGAGGCGTATAACGGCAAGCTTAACTCAAAGCTACGTACAGCACGTGACTTTGTAGGGCACGGTACCCACACACTATCAATTGCAGGTGGGAATTTTGTTTCAGGGGCACATGTATTTGCGGTTGGGAATGGAACTGCAAAGGGTGGATCTCCAAGAGCCAGAGTTGCAGCATACAAAGTGTGTTGGTCTCTAACTGATTCGGCCGATTGCTATGGTGCGGACGTTTTGGCGGCAATAGACCAAGCCATAAGTGTCTCTGACAACCGACAAGTCACGGGAGCCAGTCTTTTCATAGACTTGCCGCCAAACCAGGCCTTCCGTCTGTTACTCTCTACTGATGGTAAAGTTGCCAATGCGTCCGTTAGAGATGCCCAATTTTGTAGACGAGGAACACTTGATCCAGCAAAAGTGAGGGGCAAAATAGTAGAATGCTATAGAGAAAATAGCATAAAATCAGTGTCTGAGGGTGAGGAAGCTCTAAGAGCTGGTGCAAAGGGAATCATCGTGCGCAACCAAAAGAACCAGGGGAATACAGTTCTTGCTGAGCCCCAGGTTTTCTCAGGTGTGAACACCGAAAGTGGAGAAGTAGGTGGAAGTCCAGATTCAAGACATGTCATAACTGCCACGGGTCCCGTAACGCCTACTACCAGCACAATAAGACTGTCTCCGGCTAAAACAGTCTATGGAAGAAAGCCAGCTCCAGTTATGGCTGCGTTCTCCTCAAGAGGGCCCAATGAAATTCAGCCATCCATACTTAAGCCTGATGTGAGTGCACCTGGAGTGAGCATACTGGCTGCCTATTCTCTATTTGCAAGTGTATCTAACTTATTGACAGACAATCGTCGGGGATTTCCATTCAATGTAATGCAAGGAACTTCTATGTCTTGCCCCCATGTTGCTGGTATTGCTGGACTTCTCAAAACTCGTCATCCAAATTGGAGTCCTGCAGCTATTAAATCAGCAATTATGACTACTGGTAACGTATATCTCCTTAATTATCACCTTAAATAA	1614	0.456	MGNFRFIVSTFLLFVLLPEAVHGSKKCYIVYLGAHTHGPSPTSVDFEAATYSHYDLLSSVLESHEKAKEAMVYSYNKHINGFAAMLEKEEAAHIAKNPSVVSVFLSKEHKLHTTRSWEFLGLNRNGGNSAWQKGRFGENTIIANIDTGVWPESRSFSDKGYGPVPPKWRGENVCEISKVGGSRKNVCNRKLIGARFFADGFEAYNGKLNSKLRTARDFVGHGTHTLSIAGGNFVSGAHVFAVGNGTAKGGSPRARVAAYKVCWSLTDSADCYGADVLAAIDQAISVSDNRQVTGASLFIDLPPNQAFRLLLSTDGKVANASVRDAQFCRRGTLDPAKVRGKIVECYRENSIKSVSEGEEALRAGAKGIIVRNQKNQGNTVLAEPQVFSGVNTESGEVGGSPDSRHVITATGPVTPTTSTIRLSPAKTVYGRKPAPVMAAFSSRGPNEIQPSILKPDVSAPGVSILAAYSLFASVSNLLTDNRRGFPFNVMQGTSMSCPHVAGIAGLLKTRHPNWSPAAIKSAIMTTGNVYLLNYHLK	537

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip04g03118	537	PRINTS	Subtilisin serine protease family (S8) signature	137	156	IPR015500	-
	Aip04g03118	537	PRINTS	Subtilisin serine protease family (S8) signature	217	230	IPR015500	-
	Aip04g03118	537	PRINTS	Subtilisin serine protease family (S8) signature	491	507	IPR015500	-
	Aip04g03118	537	Pfam	Peptidase inhibitor I9	28	112	IPR010259	-
	Aip04g03118	537	SUPERFAMILY	Subtilisin-like	27	529	IPR036852	GO:0004252\|GO:0006508
	Aip04g03118	537	CDD	Peptidases_S8_3	109	526	IPR034197	-
	Aip04g03118	537	Gene3D	Peptidase S8/S53 domain	113	533	IPR036852	GO:0004252\|GO:0006508
	Aip04g03118	537	ProSitePatterns	Serine proteases, subtilase family, serine active site.	492	502	IPR023828	-
	Aip04g03118	537	PANTHER	TRIPEPTIDYL-PEPTIDASE II-RELATED	289	528	-	-
	Aip04g03118	537	PANTHER	TRIPEPTIDYL-PEPTIDASE II-RELATED	17	285	-	-
	Aip04g03118	537	Pfam	Subtilase family	137	527	IPR000209	GO:0006508\|GO:0008236
	Aip04g03118	537	ProSiteProfiles	Serine proteases, subtilase domain profile.	116	537	-	-
	Aip04g03118	537	MobiDBLite	consensus disorder prediction	391	418	-	-
	Aip04g03118	537	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	18	112	IPR037045	-
	Aip04g03118	537	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	17	285	IPR045051	-
	Aip04g03118	537	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	289	528	IPR045051	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip04g03118	Aip-Chr4	124546130	124551804	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip04g03118	44	526	Subtilisin-like Serine Gene Family	AT3G14240	35.714	6.00e-96	306

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip04g03118	-		-	aip:107637208	1076.62