Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03115 ATGGGTCGTTATATCTTTTACCTTCATCTTCTTGTTTCATCTTTTCTTCTTTCTACTTTCTTTCTGAATGCTGCACAAGCCACCAAAAAGTGCTACATTGTGTATTTGGGAGCACATTCTCATGGTCCAAACCCTTCGTCTTATGACCTTGAATCCGCTACAAATTCTCATCATGATTTACTAACTTCAACCTTGGGAAGCCATGAGAAGGCCAAAGAAGCAATTATTTATTCATATAATAAACACATAAATGGCTTTGCTGCACTACTCGAAGAGGAAGAAGCAGCACAAATTTCAAAAAACCCAAATGTTGTGTCAGTGTTCTTGAGCAAAGAGTATAAACCACACACTACACGTTCATGGGAGTTTCTTGGACTGCACAGGAGGAATGGTATGAACACAGCATGGCAGAAAGGGAGATATGGTGAAAATACAATCATAGCTAACATTGATACAGGTGTTTGGCCTGAATCTAAGAGTTTTAGTGACAAAGGAATAGGTCCTGTTCCAGCAAAATGGCGTGGCGGTAATGTGTGTGAAATTAACAAATTTCGTGGTTCAAAGAAAACTCCATGCAACAGGAAACTAATCGGAGCAAGATACTTCAGCAAAGGTTACGAGGCAAGCATAGGCAAAATTGCGCCATCACAGCACACGGCACGTGACTTCGAAGGCCATGGCACCCACACTCTATCAACGGCCGGAGGCAACTTCGTACCCGGCGCAAGCGTTTTCGGCAACGGCAACGGCACCGCAAAGGGTGGATCACCAAGAGCCAGGGTTGCTGCCTACAAGGTGTGCTGGTCAACGATCGACGAGACAAGCTGCCATGGCGCAGACGTGTTGTCCGCCATTGACCAAGCCATCAGCGACGGCGTTGACGTCATCTCCATTTCGGCTGGTGGCAGAACAGAGGTAAACCCTAATGAGATATTCACCGATGAGGTGTCCATAGGAGCGTTCCATGCGCTTTCAAGAAACGTTGTTGTTGTTGCTTCGGCGGGGAATGAAGGACCCACACCTTCAAGTGTTGTCAACGTGGCTCCATGGGTATTCACGGTTGCTGCTAGCACCATTGATAGGGACTTCAGCAGTAACGTAACTCTTGGTAACAATCAACAAGTCACGGGAGCCAGTCTTTTCGTAAACTTACCATCCAGTCAATCCTTTCCTCTGATCCTTGCATCTGATGCTAGATTTGCTAATGCCACAATTCAAAACGCTCAACTTTGTATGCCTGGAACACTCGATCCAGCAAAAGCAAGGGGCAAAATAGTCATGTGCCTTCGAGGTGGGAAAATAAGGTCAGTTGCTGAAGGCCAAGAAGCTTTATCTGCAGGTGCAGTTGGAGTGGTTATGGAAAACGATGCTCAAAGTGGAAACACAGTTCTAGCTGAGCCTCATGTTTTGTCCACTACAAATGTGGCTAAAAATAACCAGGACAAAAATGTTCATGATTATTACAACAGTACCACGAGCCCTACTATTAACATGTCTGCAGCAAGAACATTGCTTGGAACAAAGCCAGCTCCAGTTATGGCCTCATTCTCATCTAGAGGTCCAAATCCGATTCAACCATCAATACTCAAGCCTGATATAACTGCACCAGGGGTAAACATACTGGCTTCATATTCCTTAGCAGCAAGTGCATCTAACTTGCCATCAGACACACGCCGCGGGTTCCGGTTCAATGTGCTACAAGGAACTTCCATGTCATGCCCTCATATCTCTGGTGTTGCTGGTCTTCTCAAAACTCGTCATCCAAATTGGTCTCCAGCAGCTATTAAATCCGCAATCATGACCACAGCAACTACTCAAGATAACACCAATGGAGCTATACAAGATGCATTTGATAATACATTAGCCACACCTTTTGCTTATGGTTCAGGGCATGTTCAACCAGACTTAGCCATGGACCCTGGACTTGTTTATGACATTACCATTCTTGATTACTTGAGCTTCTTATGTGCTTCTGGATACAGTCAAAGCCTCATAGCATCACTCAATTCCAACAAGAACTTCATATGCTCTGGATCTCACAGAGTAACAGACTTAAATTACCCTTCAATCACATTACCAAATCTCGGATCTGACGCGGAGAATGTTACTCGCACGGTTACTAATGTTGGACCTCCAGGAACATATGTTGCAAATGCAAAGTTGCCTGGATTTAACATTGTTGTGGTGCCAAGTTCCTTAACGTTCAAGAGAGTTGGTGAGAAGAAGAGGTTCCAAGTAATTGTGAAGGCAAGAAGTGTGAGTCAGAATGGGAATTATCAATTTGGAGAGTTGAAATGGACAAATGGGAAGCACATTGTTAGAAGTCCAATTGTTGTGAGGCGCACATCATGA 2352 0.4447 MGRYIFYLHLLVSSFLLSTFFLNAAQATKKCYIVYLGAHSHGPNPSSYDLESATNSHHDLLTSTLGSHEKAKEAIIYSYNKHINGFAALLEEEEAAQISKNPNVVSVFLSKEYKPHTTRSWEFLGLHRRNGMNTAWQKGRYGENTIIANIDTGVWPESKSFSDKGIGPVPAKWRGGNVCEINKFRGSKKTPCNRKLIGARYFSKGYEASIGKIAPSQHTARDFEGHGTHTLSTAGGNFVPGASVFGNGNGTAKGGSPRARVAAYKVCWSTIDETSCHGADVLSAIDQAISDGVDVISISAGGRTEVNPNEIFTDEVSIGAFHALSRNVVVVASAGNEGPTPSSVVNVAPWVFTVAASTIDRDFSSNVTLGNNQQVTGASLFVNLPSSQSFPLILASDARFANATIQNAQLCMPGTLDPAKARGKIVMCLRGGKIRSVAEGQEALSAGAVGVVMENDAQSGNTVLAEPHVLSTTNVAKNNQDKNVHDYYNSTTSPTINMSAARTLLGTKPAPVMASFSSRGPNPIQPSILKPDITAPGVNILASYSLAASASNLPSDTRRGFRFNVLQGTSMSCPHISGVAGLLKTRHPNWSPAAIKSAIMTTATTQDNTNGAIQDAFDNTLATPFAYGSGHVQPDLAMDPGLVYDITILDYLSFLCASGYSQSLIASLNSNKNFICSGSHRVTDLNYPSITLPNLGSDAENVTRTVTNVGPPGTYVANAKLPGFNIVVVPSSLTFKRVGEKKRFQVIVKARSVSQNGNYQFGELKWTNGKHIVRSPIVVRRTS 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03115 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 568 578 IPR023828 -
Aip04g03115 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 780 IPR045051 -
Aip04g03115 783 Pfam Subtilase family 142 609 IPR000209 GO:0006508|GO:0008236
Aip04g03115 783 ProSiteProfiles Serine proteases, subtilase domain profile. 120 638 - -
Aip04g03115 783 Pfam Peptidase inhibitor I9 32 114 IPR010259 -
Aip04g03115 783 Gene3D - 655 782 - -
Aip04g03115 783 SUPERFAMILY Subtilisin-like 115 642 IPR036852 GO:0004252|GO:0006508
Aip04g03115 783 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Aip04g03115 783 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Aip04g03115 783 PRINTS Subtilisin serine protease family (S8) signature 567 583 IPR015500 -
Aip04g03115 783 CDD PA_subtilisin_like 366 495 - -
Aip04g03115 783 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 780 - -
Aip04g03115 783 Gene3D Peptidase S8/S53 domain 145 651 IPR036852 GO:0004252|GO:0006508
Aip04g03115 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 116 IPR037045 -
Aip04g03115 783 Gene3D - 360 505 - -
Aip04g03115 783 Pfam Fibronectin type-III domain 684 779 IPR041469 -
Aip04g03115 783 CDD Peptidases_S8_3 113 604 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03115 Aip-Chr4 124457677 124462440 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03115 32 780 Subtilisin-like Serine Gene Family AT2G04160 53.316 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03115 - - gmx:100803751 1172.53