Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03111 ATGAAGTCAGAGTTACCTGACTATTGTTCTTTTAAAGAAGATTCCTTAATTGGTTGCAATACACCAGACTTCAGATCTTGCCATTCTGTCTCACAAACTAGTAAAATTAAGCACCTCATCATAATTGCTGTCCCGGTCACCTGCAACATTCTTATATTCACAATTCTAGCAATATTGCTTTTCGCAAGACGCACCAAAAGTAAGAAACTCGAGAAAAGAACGGCAAAAAACGGAGACTTGTTTTTTATATGGAACTATGATGGGAAAATTGCTTTTGAAGATATCATTGAAGCAACACAGGACTTTGATATCAGATACTGCATAGGAACTGGTGGATATGGCAGTGTGTATAGAGCACAACTTCCAAGTGGCAAAGTTGTTGCATTGAAGAAACTTCATCAATTGGAGTCTCAAAATCCTTCTTTTGAAAAGAGTTTCCGCAATGAGGTCAAGATGTTAACACAAATCATCCATAGAAACATTGTCAAGCTTCAGGGATTTTGTCTTCATAATCGTTTGCATGTTGTTGTCTCAGACTTTGGCACAGCTAGACTTATTGATCCTGATTCTTCAAACCAAACCTTGCAAGTTGGAACATATGGATATCTTGCACCAGGTCTATTGCACAGAATTGGCCTACACGTTGACTTGACAGAAAAATGTGATGTACACAGTTTTGGAGTGGTGGCATTGGAAACATTAATGGGAAGACACCCAGGAGATCTAATCTTGTCTTTGTTCGAATCTTCTAGCAAAAACATAATAGTAAAAGATCTCTTGGACTCACGCATCCATTTACCATCATGTCAAAAAGACATTCAAGTTATAGTTCAGGTGGTAACATTGGCATTGGCATGCTTGCACTCTAATTCAAAGTCAAGACTATCAATGCAGCAAGTGGCTCATGAACTTTCTAATTTCAAACAATCATCACTGATTTTGCTTTTGTCTGAAATCACAGTCCAACTGTTGATAGCTTAG 981 0.3782 MKSELPDYCSFKEDSLIGCNTPDFRSCHSVSQTSKIKHLIIIAVPVTCNILIFTILAILLFARRTKSKKLEKRTAKNGDLFFIWNYDGKIAFEDIIEATQDFDIRYCIGTGGYGSVYRAQLPSGKVVALKKLHQLESQNPSFEKSFRNEVKMLTQIIHRNIVKLQGFCLHNRLHVVVSDFGTARLIDPDSSNQTLQVGTYGYLAPGLLHRIGLHVDLTEKCDVHSFGVVALETLMGRHPGDLILSLFESSSKNIIVKDLLDSRIHLPSCQKDIQVIVQVVTLALACLHSNSKSRLSMQQVAHELSNFKQSSLILLLSEITVQLLIA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03111 326 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 174 319 - -
Aip04g03111 326 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 20 176 - -
Aip04g03111 326 Pfam Protein kinase domain 171 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03111 326 ProSitePatterns Protein kinases ATP-binding region signature. 108 130 IPR017441 GO:0005524
Aip04g03111 326 SUPERFAMILY Protein kinase-like (PK-like) 92 310 IPR011009 -
Aip04g03111 326 Gene3D Transferase(Phosphotransferase) domain 1 174 320 - -
Aip04g03111 326 ProSiteProfiles Protein kinase domain profile. 1 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03111 326 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 174 319 - -
Aip04g03111 326 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 20 176 - -
Aip04g03111 326 Gene3D Phosphorylase Kinase; domain 1 89 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03111 Aip-Chr4 124382386 124383631 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03111 156 218 Receptor kinase-like Gene Family AT4G08850 47.692 1.50e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip04g03111 Pkinase 3.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03111 - - ahf:112728702 334.339