Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03110 ATGAATGATGAAAATTGCACTGGAAATTCTAGTGAAGGCAACAATAATATTACATGGTGGAAGAGTAGTGCAGCCACAGAGAAGAACAAGGTGAAAATGAGAAGGAAACTAAGAGAGCCAAGGTTTTGTTTCCAAACAAGAAGTGATGTTGATGTTCTTGATGATGGTTATAAATGGAGGAAATATGGCCAAAAAGTTGTCAAGAATAGCCTTCATCCAAGGAGTTATTACAGGTGTACACATAGCAACTGCAGGGTGAAGAAGAGAGTTGAAAGACTCTCAGAAGATTGTAGAATGGTGATAACCACTTATGAAGGTAGACACAATCACATCCCTTCCGATGACTCAAATTCTTCAGACCATGAATGTTTCACTTCTTTTTAA 384 0.3776 MNDENCTGNSSEGNNNITWWKSSAATEKNKVKMRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHIPSDDSNSSDHECFTSF 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03110 127 ProSiteProfiles WRKY domain profile. 48 110 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g03110 127 Pfam WRKY DNA -binding domain 54 110 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g03110 127 SMART WRKY_cls 53 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g03110 127 SUPERFAMILY WRKY DNA-binding domain 45 110 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip04g03110 127 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 2 125 - -
Aip04g03110 127 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 2 125 IPR044810 GO:0003700
Aip04g03110 127 Gene3D WRKY domain 39 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03110 Aip-Chr4 124381677 124390213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03110 4 127 WRKY Transcription Factor Family AT2G44745 77.778 5.90e-71 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip04g03110 WRKY 4.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03110 - - aip:107637204 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03110 04 124381677 124390213 Aip04g03110 04 124381677 124390213 ECH