Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03087 ATGTTATCAGAGTTGATGAACTTTTTGAGGGCCTGCTTTCGGCCAGGTTCGGATAGGTATGGACACGGCGGTTCGGATGCTGGAGGAAAGCAGGATGGACTATTGTGGTACAAAGACTCCGGGCAGCATTTGCACGGCGAGTTTTCGATGGCTGTTGTCCAAGCCAACAACTTGCTGGAGGATCAGAGCTATATCAGATCAGGATGTTTAAGCACAAATGAGTCTGGCCCTTTTGGCACCTTTGTTGGTGTCTATGATGGCCATGGAGGGCCAGAGACGTCGCGGTTTATCAATGACCATCTAGTTCACCATCTTAAGAGGTTTAGTGCAGAGCAACAATCAATGTCAGTGGATGTTATTCGCAAATCGTTCCAAGCAACAGAAGAAGGATTTACATCCCTGGTTGCCACACAATGGTCGATGAAACCACAAATTGCAGCTGTAGGATCATGCTGTCTTGTTGGTGTTATATGCAATGGAAGCCTTTATGTGGCGAATGTTGGTGATTCGCGGGCTGTTATGGGAAGAGCAGTTAAGGCAACTGGGGAAGTTTTGGCTGTCCAGTTGTCTGCAGAACACAATGCATCGATAGAATCCGTAAGACAGGAGCTGAAATCTATGCACCCTGATGATTCACAGATTGTTGTTCTGAAGCATAATGTGTGGCGTGTGAAGGGCCTTATCCAAGTTTCTCGATCTATTGGCGATGTATATCTTAAAAAGGCCGAGTTCAACCGAGAGCCTCTATATGCAAAGTTTCGCCTTCGCGAACCAATAAAGAAGCCTATACTGAGCTCAGAACCATCTATATCGGTGCACCAGTTGCAGCCACAAGATCAGTTTGTTATATTCGCATCCGATGGGCTTTGGGAACACTTTAGTAATCAAGAGGCAGTGGATATAGTTCAACATAATCCCCGCAATGGAATTGCAAGGAGGCTGGTTAAAATTGCTCTGCAAGAAGCAGCAAAGAAAAGAGAAATGAGATATTCAGACCTTAAGAAAATCGACCGAGGGGTTCGTCGCCATTTCCACGACGATATCACTGTGATTGTTGTGTTCATAGACTCAACTTTTGTGAGCAGGGCAACCTCTGTCAAGTTCCCTTGTATTTCTCTTAGAGGCGGCGGCGTCAGCCTTCCTTCTAACACACTGGCACCTTGTACAACGCCGACAGAGGCCGGCACCACCTGA 1194 0.4665 MLSELMNFLRACFRPGSDRYGHGGSDAGGKQDGLLWYKDSGQHLHGEFSMAVVQANNLLEDQSYIRSGCLSTNESGPFGTFVGVYDGHGGPETSRFINDHLVHHLKRFSAEQQSMSVDVIRKSFQATEEGFTSLVATQWSMKPQIAAVGSCCLVGVICNGSLYVANVGDSRAVMGRAVKATGEVLAVQLSAEHNASIESVRQELKSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPIKKPILSSEPSISVHQLQPQDQFVIFASDGLWEHFSNQEAVDIVQHNPRNGIARRLVKIALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFIDSTFVSRATSVKFPCISLRGGGVSLPSNTLAPCTTPTEAGTT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03087 397 PANTHER ALPHABET, ISOFORM E-RELATED 5 387 - -
Aip04g03087 397 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Aip04g03087 397 SMART PP2C_4 41 353 IPR001932 -
Aip04g03087 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 387 - -
Aip04g03087 397 SUPERFAMILY PP2C-like 54 356 IPR036457 -
Aip04g03087 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Aip04g03087 397 CDD PP2Cc 48 355 IPR001932 -
Aip04g03087 397 Pfam Protein phosphatase 2C 80 324 IPR001932 -
Aip04g03087 397 Gene3D - 36 365 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03087 Aip-Chr4 124145690 124147797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03087 1 395 PP2C-type Phosphatase Gene Family AT4G38520 74.177 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03087 - K01102 tcc:18607514 686.411