Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03085 ATGGCCGGCATAGACTTGGGTTCAGCATCACACTTTGTTCATCACCTTCAACGCCCTGACCTTGAAGATGATGATAATAACCAAGACCAAGACCCGAGCAACAACCATCACGAGGGTCTTGACCTAGTTTCGCCAAATCAAGGCCCTGGTGATGTTGTTGCTCGTAGGCCAAGAGGGAGACCTCCGGGTTCCAAGAACAAGCCTAAGCCACCGGTGATCATCACAAGGGAGAGTGCAAACACTCTTAGGGCACACATCCTTGAAGTTAGTAGTGGTTGTGATGTGTTTGACTCTGTCGCCACTTATGCAAGAAAACGTCAACGGGGAATCTGTGTTCTTAGCGGTAGCGGAACTGTTACTAACGTCACGCTCCGACAACCAGCAGCTGCCGGAGCAGTCGTGACGCTTCATGGAAGATTTGAGATACTTTCTCTATCAGGATCCTTTCTGCCACCTCCTGCTCCACCAGGGGCCACAAGTTTAACTGTGTTTCTTGGTGGAGGCCAGGGACAAGTGGTAGGAGGGAATGTTATTGGGCCTTTAGTGGCTTCTGGGCCTGTTATTGTTATTGCCTCGTCGTTTACTAATGTAGCGTATGAGAGGTTGCCCTTAGACGAAGATGAGACTCTTCAGATAGAACAAGGGCAACCTTCTTCTGGTGGTGGTGGTGTCAGTGGCAGTGGTGTTAATAACTCTTTTCCAGATCCTTCTTCAGGGTTACCGTTCTTCAATCTACCTCTAAACATGCCTAATTTGCCGGTTGATGGTTGGGCCGGTGGGAACTCTAGTGGTGGAAGACAATCTTTTTGA 810 0.4914 MAGIDLGSASHFVHHLQRPDLEDDDNNQDQDPSNNHHEGLDLVSPNQGPGDVVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVIGPLVASGPVIVIASSFTNVAYERLPLDEDETLQIEQGQPSSGGGGVSGSGVNNSFPDPSSGLPFFNLPLNMPNLPVDGWAGGNSSGGRQSF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03085 269 Gene3D - 82 216 - -
Aip04g03085 269 MobiDBLite consensus disorder prediction 1 73 - -
Aip04g03085 269 CDD DUF296 83 192 IPR005175 -
Aip04g03085 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Aip04g03085 269 MobiDBLite consensus disorder prediction 15 36 - -
Aip04g03085 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 269 - -
Aip04g03085 269 ProSiteProfiles PPC domain profile profile. 79 218 IPR005175 -
Aip04g03085 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 15 269 IPR014476 GO:0003680
Aip04g03085 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03085 Aip-Chr4 124129949 124131377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03085 1 269 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 56.352 6.29e-97 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03085 - - gmx:100803960 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03085 04 124129949 124131377 Aip04g03085 04 124129949 124131377 ECH