Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03078 atgcgagccagtgaagcaacgacgggTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACATTTCAACCAGCATGTGTTTAAGATGGAACAAGAGAGATATACAAAAGAAAGGATTGACTGGAGCTACTTAGAATTTGTGGATAATCAAGATGTACTTGATCTAATTGAAAAGGTTTATACATACTTTATGGCTATGCTTCAGTTTGAAATATTTATAGCTAGATTTCAATCTGATAGAGCAACATCTAGGGAGAAGAGGGAGACCGAGTCGTCGCGCCTACCGCCGTCCATCTCGCGTCGTCGCCGTTTTGCCGAGCTGCTTTGCAGCGCCGTCCTGCCCCGACCGCCGCCATCGTGCCACCGACCGaggaggccgagggtcactgtcttcgaagcttccatcgtcactgtgcaaagccgccacctctga 444 0.3559 MRASEATTGFEQFCINFTNEKLQQHFNQHVFKMEQERYTKERIDWSYLEFVDNQDVLDLIEKVYTYFMAMLQFEIFIARFQSDRATSREKRETESSRLPPSISRRRRFAELLCSAVLPRPPPSCHRPRRPRVTVFEASIVTVQSRHL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03078 147 Gene3D - 6 113 - -
Aip04g03078 147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 76 IPR027417 -
Aip04g03078 147 Pfam Myosin head (motor domain) 8 80 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip04g03078 147 PANTHER MYOSIN 7 81 - -
Aip04g03078 147 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 7 81 - -
Aip04g03078 147 ProSiteProfiles Myosin motor domain profile. 1 147 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03078 Aip-Chr4 124011069 124016365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03078 7 71 Myosins gene family AT1G54560 81.538 4.18e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03078 K10357 - pda:103704019 114.005