Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03074 ATGCAGAATCTTTTGGTGTTGATGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCAATGCTAGTTCTAACAACAGAAGCAGAAGAATCTTGCATGAACCCTTTGTACCATTGGAAGCACACCCACCCACTGAGCCACCAAAGCCATCACCTTCTTCTAACACCACTGCAATTCAAAAGCAAAACCCAAAGCACCCTTCCTCCACTGCAACAGCCACCGCCTCCACCTCTACCACTACCACCACCACCACCACAACCACAACTACACCAAATGATTCACCGTTTTTCCCAAACTACCCTTCACAGCCACCTCCACCGCCACAATCATTCGCAGGCTTTGCTTCCTTCCCAGCTAACATTTCCTCACTCATTCTTCCACATTCTCCAACTCCTACTCACTCCAATTCCAAGCTTCTCCCCGTTGCTCTCTCCGCCGTCGCATGCGCGGTCGTCGCCGTCGCCGTCTCTGCATTTTTCTATCTTCGACGCCGTCGCCGGAACCGTGGCCCCGGAGAGAACAAGGATGTCAGTCCCGACGGTGGTCGCCGGCGGGAAACCGCCGCGAAGCACCGGCAGTCTCCTACTGCCGCTGGGTCCGAGTTTCTCTACCTCGGCACCGTCGTCAATTCGCGCCGGATCGAAGGAGGCGAAGATACTCATGGTAATGCTGTTACTGAATCTCCTTTACTTTCGCCACTTTCATTGCCACCTAATAGAGCTCCGGAGGAGAAAACCCTAATTGCAAATTTGGACTCATCTTCTTCATCACCACAAAAGAAGGTTTCGGAAACATACGAAGCTGCATCACCAAGGAATTCTAATGTCTCCAATGGAAGTAGAAAGTCTTCCTCATCATCAGCATCAGCAAGGGTTTCTAATGGTTCCAATGGAAGTAGAAAATCTTTGTCACGATCAGCATCGTTAGACAGGGTTTTGAAGACTAGTGAAGTTGCATCATTGGCCTCGTCTAGGATTTCTAGTTCTTCCAATGCAAGCAGAAAATCTAAATCATCATCATCACAAGAGAGGATCTCGGAGACGAATGAAGTTGAAACTGCAACTGCAATTGCATCTGCATTACCATTGACATCACCTCCAAGGCTATCTAATGTTTCTTCCAATGGAAGTGCAAAGTTTATGGCATCATCACCATTGTCTTCGGCTTTCTCTCTGCCTTCTTCTCCGGAGAAGGCAAGGAGTCATAACGGTTTTGATCAGTCTCCGAGAATGTCCAGTGTCTCAGACCAGTTTAGGCAACCGGGTTTGTCTTCAGTGCCATTGTCACCATCTCTACTTTCATCACCAGAGACAGAAAGAGGGTTTAATTTCAGTAGCAGTTTCAATTCAACTGAATCAGCATCAATTGCTAATGGTGCTTCACAGAGGAAGCATTGGGAGATACCTGCATTGAAACAATGGGCGATACCCGGTATCACAACACCACTTGCTCCGCCTCCTCCGCCACCTCCTCCTCCACCTGCAGCTACACTGCAGCAGCGGCAGCGGAAGCAGTGGGAGGTGCCATCTCCCACAACACCTGTTGGTCAATCTGTATCGAGGCCACCAGAGTTGAAACCTCCTTCCAGGCCTTTTGTGTTGCAGAACACAACATTGGTTTCCCCTGTTGATCTGACCCCAAGTTCTCAGGGTTCGGCTGAAGCTGAAGAGGCTGCGAAGCCAAAGTTGAAGCCCTTGCACTGGGACAAAGTAAGGTCAAGTTCTGATCGTGAAATGGTGTGGGATCAGTTGAAGTCGAGCTCTTTCAAATTGAATGAGGAAATGATTGAAACATTGTTTGTAGCAAACATGCCAAACTCGAAACCAATGGATTCTACTTCATGCACAGTTCTTCCCCATTCAAGCCAGGAGGAGAAAGTACTTGATCCTAAAAAGTCCCAAAACATTGCAATCTTGCTGAGAGCACTTAATGTCACTATAGAAGAAGTGTGTGAAGCACTTTTAGAAGGTAGTGCTGATACACTTGGAGCAGAACTACTTGAAAGCTTGTTAAAAATGGCTCCGATTAAGGAAGAAGAGCGTAAATTGAAGGAATACAATGATGACTCACCAACCAAGCTTGGCCCAGCTGAGAAATTCTTGAAGGCATTGCTTGATGTACCTTTTGCGTTTAAAAGGGTGGAAGCAATGCTTTACATAGTCAATTTTGACTCTGAAGTCGAGTATCTTAAGAAATCCTTTCAAGGTCTAGAGGCTGCCTGTGAAGAGTTGCGAAGTAGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTGCTTAAAACTGGGAACCGCATGAATGTGGGGACAGACCGTGGTGATGCGCAGGCCTTTAAACTTGACACACTTCTCAAGCTGGCCGATGTCAAAGGTGCAGATGGAAAAACGACGCTACTGCACTTTGTTGTCCAAGAGATCATAAGAACTGAAGGTGCTCGGCTCTCCAGTACTAACCAAACCCCAAACTCTTCCTTGGCCGAAGATGTTGCGTTCCGGAGGCTTGGCCTGCAAGTAGTATCTAGTCTGAGTTCAGAGCTAGCAAGTGTCAAGAAGGCTGCTACCATGGATTCTGAGGTTCTCAGTAATGATGCGGCCAAGCTCTCCAAAGGGATTGCAAACATTGCAGAGGTTGTACAATTGAACGAAAAAGCTGGGTCAAATGAGAAGTTTACAGAATCAATGAACAAGTTCATTAGAATGGCTGAGGAAGAAATTCTGAAGATTCAAGCCCAAGAAAGTGTTGCTATGACCCTTGTGAAGGAAATCACAGAGTATTTTCATGGTGACTTGGCAAAGGAAGAAGCTCATCCATTCAGAATCTTCATGGTTGTAAGAGACTTTCTTGCAGTTCTTGACCGTGTATGCAGAGAAGTTGGTATGATAAATGAGAGAACCATGGTTAGTTCAGCACATAGATTCCCTGTACCAGTTAACCCAATGCTTCCACAACCAGTTAACCCAATGCTTTCACAACCCCTTCCTGGATTGCATGGAAGGAGACAGAATAGTGAATCTTCAGATGATGATACTCCATCATCTTAG 3033 0.4642 MQNLLVLMFFFFFFFFFFCNASSNNRSRRILHEPFVPLEAHPPTEPPKPSPSSNTTAIQKQNPKHPSSTATATASTSTTTTTTTTTTTTPNDSPFFPNYPSQPPPPPQSFAGFASFPANISSLILPHSPTPTHSNSKLLPVALSAVACAVVAVAVSAFFYLRRRRRNRGPGENKDVSPDGGRRRETAAKHRQSPTAAGSEFLYLGTVVNSRRIEGGEDTHGNAVTESPLLSPLSLPPNRAPEEKTLIANLDSSSSSPQKKVSETYEAASPRNSNVSNGSRKSSSSSASARVSNGSNGSRKSLSRSASLDRVLKTSEVASLASSRISSSSNASRKSKSSSSQERISETNEVETATAIASALPLTSPPRLSNVSSNGSAKFMASSPLSSAFSLPSSPEKARSHNGFDQSPRMSSVSDQFRQPGLSSVPLSPSLLSSPETERGFNFSSSFNSTESASIANGASQRKHWEIPALKQWAIPGITTPLAPPPPPPPPPPAATLQQRQRKQWEVPSPTTPVGQSVSRPPELKPPSRPFVLQNTTLVSPVDLTPSSQGSAEAEEAAKPKLKPLHWDKVRSSSDREMVWDQLKSSSFKLNEEMIETLFVANMPNSKPMDSTSCTVLPHSSQEEKVLDPKKSQNIAILLRALNVTIEEVCEALLEGSADTLGAELLESLLKMAPIKEEERKLKEYNDDSPTKLGPAEKFLKALLDVPFAFKRVEAMLYIVNFDSEVEYLKKSFQGLEAACEELRSSRMFLKLLEAVLKTGNRMNVGTDRGDAQAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLSSTNQTPNSSLAEDVAFRRLGLQVVSSLSSELASVKKAATMDSEVLSNDAAKLSKGIANIAEVVQLNEKAGSNEKFTESMNKFIRMAEEEILKIQAQESVAMTLVKEITEYFHGDLAKEEAHPFRIFMVVRDFLAVLDRVCREVGMINERTMVSSAHRFPVPVNPMLPQPVNPMLSQPLPGLHGRRQNSESSDDDTPSS 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03074 1010 PANTHER FORMIN-RELATED 8 438 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip04g03074 1010 MobiDBLite consensus disorder prediction 167 190 - -
Aip04g03074 1010 MobiDBLite consensus disorder prediction 980 1010 - -
Aip04g03074 1010 MobiDBLite consensus disorder prediction 167 200 - -
Aip04g03074 1010 SMART it6_source 552 963 IPR015425 -
Aip04g03074 1010 MobiDBLite consensus disorder prediction 247 350 - -
Aip04g03074 1010 MobiDBLite consensus disorder prediction 479 496 - -
Aip04g03074 1010 Gene3D Formin, FH2 domain 549 957 IPR042201 -
Aip04g03074 1010 MobiDBLite consensus disorder prediction 497 518 - -
Aip04g03074 1010 PANTHER FORMIN-RELATED 340 1009 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip04g03074 1010 MobiDBLite consensus disorder prediction 477 528 - -
Aip04g03074 1010 ProSiteProfiles Formin homology-2 (FH2) domain profile. 552 974 IPR015425 -
Aip04g03074 1010 PANTHER FORMIN-LIKE PROTEIN 1 340 1009 - -
Aip04g03074 1010 MobiDBLite consensus disorder prediction 541 560 - -
Aip04g03074 1010 Pfam Formin Homology 2 Domain 556 948 IPR015425 -
Aip04g03074 1010 MobiDBLite consensus disorder prediction 96 111 - -
Aip04g03074 1010 PANTHER FORMIN-LIKE PROTEIN 1 8 438 - -
Aip04g03074 1010 MobiDBLite consensus disorder prediction 39 112 - -
Aip04g03074 1010 MobiDBLite consensus disorder prediction 385 449 - -
Aip04g03074 1010 MobiDBLite consensus disorder prediction 51 95 - -
Aip04g03074 1010 MobiDBLite consensus disorder prediction 213 350 - -
Aip04g03074 1010 SUPERFAMILY Formin homology 2 domain (FH2 domain) 484 960 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03074 Aip-Chr4 123946524 123950862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03074 556 966 FH2 protein (formin) Gene Family AT2G43800 63.121 1.73e-178 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03074 - - aip:107635200 1346.26