Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03019 ATGTGTGGGATATTCGCGTATCTCAATTACAACGTGAATAGGGAGAGGAGGTACATATTGCAGGTCCTATTCAATGGTCTTCGCCGTTTGGAGTATCGCGGTTACGATTCCGCCGGAATCGCCATTGACTCTGATCCAAAACCCGCGCCGCAAGCCTCCTCCGCTTCCGATTCCGATCCTCCTCCTATCGTCTTTCGCCAGGAAGGCAACATCGAGTCCCTCGTCAAATCTGTCTACCAAGATGTGGCTAAATTGGAACTAAACTTGGAGGCATCATTTTCCACTCATGCTGGATTAGCACACACCCGGTGGGCCACTCATGGAGAGCCTGCTCCCAGAAACAGTCATCCACAGAGCTCAGGTCCCGGAAATGAATTCCTAGTTGTTCATAATGGGGTTATCACTAACTACGAGGTTTTGAAAGAAACACTCATCCGACATGGATTCATCTTTGAATCTGACACTGACACAGAAGTCATTCCAAAGCTAGCAAAGTATGTTTATGACAAAGCAAATGAAGCAGCAGATGGCCAGGTTGTTACCTTTAGTCAAGTTGTTCTGGAAGTTATGAGGCATCTTGAAGGAGCCTATGCCCTTATTTTCAAAAGTTCGCATTACCCTAATGAATTGATTGCGTGCAAGCGTGGTAGCCCACTGCTTCTAGGTGTTAAAGAAATGACAGAAAATAAGGAGAATGGTTCTGCATTTGATGACAACAAAACCCTATCAAAAGATGGAGGCCCCAAGGAATTATTTTTATCTAGTGACGCCAACGCTGTGATTGAGCATACAAAAAAAGTGCTTGTTATTGAAGATGGTGAAGTAGTTCATCTCAAGGAAGGTGGGGTTTATATTTTGAAGTTTGAAAATGACAAGGGAGAACGTCAACCAGAATCTCTAACAACCACTATGAGAGGGAGGCTTATACTTAGAGGATCTAGTAAATCCAAGTCTGTTTTGCTGGGTGGACTGAAGGATCACCTCAAAACAATTAGGCGTAGTAGAAGGATACTTTTCATTGGTTGTGGTACAAGTTACAATGCTGCTTTGGCAGCAAGGCCTATCTTAGAAGAACTTACTGGTATTCCTGTCACTATGGAGATTGCTAGTGATCTACTGGATCGGCAGGGCCCAGTATACAGAGAAGATACAGCTGTTTTTGTTAGTCAGTCCGGTGAAACTCATGACACGCTAGTTGCACTGCAATATGCTTTAGACAATGGTGCATTATGTGTTGGAATAACAAACACTGTGGGTAGTGCAATTGCAAGGAATACTCATTGCGGTGTTCATATAAATGCTGGTGCTGAGATAGGTGTAGCAAGTACCAAGGCATACACAAGTCAAATAGTGGTGATGGCCATGTTGGCTCTTGCAATAGGAGGTGATACACTCTCCAATCAAGCTAGAAGAGAAGCCATAATAGATGGTCTATTTGACTTGCCAAATAAAGTCAGAGAGGTGCTGAAGCTTGATCAGGAAATGAAGGATCTCGCAAAGCTATTGAGTGCCGAGCAGTCGCTTCTCGTCTTTGGGAGAGGATACAACTACGCTACTGCTCTGGAGGGAGCTTTGAAAGTAAAGGAAGTGGCACTTACGCACAGTGAGGGAATACTTGCTGGTGAAATGAAGCATGGTCCTTTAGCATTAGTGGATGAAACTCTCCCAATTGTCGTTATAGCCACGCGCGATGCTTGCTTCAGCAAGCAGCAGTCTGTTATTCAGCAACTTATTGCCCGCAGAGGCCGCCTTGTAGTTATGTGTTCAAAAGGGGATGCTTCTTCTGTAAGCCCTAGTGAAACTGTTAGGGTAATTGAAGTTCCACAAGTTGTGGACTGTCTTCAACCTGTTATTAATGTAGTTCCCTTACAGTTACTGGCGTATCATCTCACTGTACTGAGGGGATTCAACGTTGACCAGCCACGTAATCTTGCCAAGAGTGTCACTACACAGTAG 1956 0.4448 MCGIFAYLNYNVNRERRYILQVLFNGLRRLEYRGYDSAGIAIDSDPKPAPQASSASDSDPPPIVFRQEGNIESLVKSVYQDVAKLELNLEASFSTHAGLAHTRWATHGEPAPRNSHPQSSGPGNEFLVVHNGVITNYEVLKETLIRHGFIFESDTDTEVIPKLAKYVYDKANEAADGQVVTFSQVVLEVMRHLEGAYALIFKSSHYPNELIACKRGSPLLLGVKEMTENKENGSAFDDNKTLSKDGGPKELFLSSDANAVIEHTKKVLVIEDGEVVHLKEGGVYILKFENDKGERQPESLTTTMRGRLILRGSSKSKSVLLGGLKDHLKTIRRSRRILFIGCGTSYNAALAARPILEELTGIPVTMEIASDLLDRQGPVYREDTAVFVSQSGETHDTLVALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTLSNQARREAIIDGLFDLPNKVREVLKLDQEMKDLAKLLSAEQSLLVFGRGYNYATALEGALKVKEVALTHSEGILAGEMKHGPLALVDETLPIVVIATRDACFSKQQSVIQQLIARRGRLVVMCSKGDASSVSPSETVRVIEVPQVVDCLQPVINVVPLQLLAYHLTVLRGFNVDQPRNLAKSVTTQ 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03019 651 Gene3D - 487 636 - -
Aip04g03019 651 Pfam Glutamine amidotransferase domain 93 204 - -
Aip04g03019 651 Gene3D - 299 650 - -
Aip04g03019 651 PANTHER GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2-LIKE 1 292 - -
Aip04g03019 651 ProSiteProfiles SIS domain profile. 327 466 IPR001347 GO:0097367|GO:1901135
Aip04g03019 651 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 281 IPR017932 -
Aip04g03019 651 PANTHER GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2-LIKE 295 651 - -
Aip04g03019 651 CDD GFAT 2 278 - -
Aip04g03019 651 CDD SIS_GlmS_GlmD_1 336 461 IPR035466 -
Aip04g03019 651 MobiDBLite consensus disorder prediction 42 63 - -
Aip04g03019 651 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 292 - -
Aip04g03019 651 SUPERFAMILY SIS domain 323 650 IPR046348 GO:0097367|GO:1901135
Aip04g03019 651 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 287 IPR029055 -
Aip04g03019 651 CDD SIS_GlmS_GlmD_2 493 649 IPR035490 -
Aip04g03019 651 Pfam SIS domain 502 633 IPR001347 GO:0097367|GO:1901135
Aip04g03019 651 Pfam SIS domain 331 458 IPR001347 GO:0097367|GO:1901135
Aip04g03019 651 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 295 651 - -
Aip04g03019 651 ProSiteProfiles SIS domain profile. 498 641 IPR001347 GO:0097367|GO:1901135
Aip04g03019 651 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 298 IPR029055 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03019 98 245 PRT Gene Family AT4G38880 27.632 4.45e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03019 K00820 - gmx:100792835 1106.28