Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03014 ATGGCCAATAATTCTATTCTATCATCATCACTAATCTGTTGCTTATTATTTCTTTTGTTGAATCACCATTATTGGATCTTTGTTGAAGCTGCTCCTTCAGGTTCTCTTGTTACACAGCTCCCTGGCTTTGATTCCAATTTCCCATCCAACCATTACTCCGGATACATAAATATTGATGGAAATGGTGAGAATGGGAAGAACCTGTTCTACTACTTGGTTAGTTCAGAAAGAAATCCAAAGAAGGATCCACTTGTTCTGTGGCTCAATGGTGGTCCTGGCTGCTCTAGTTTTGATGGATTTGTTTATGAGCATGGACCGTTCAACTTTGAGGCAGCAAAATCAAAAGGGAGTCTCCCCACTTTGCATACTAATCCTTACAGCTGGTCTAAGGTTTCAAATATAATATATTTGGATTCTCCAGCGGGGGTTGGGCTCTCATACTCCAAGAACTCAACCAAATATGGTTACATGGTGGGTAATGGTGTCACGGACGAGATTTTTGATGGAAATGCTCTTCTCCCATTTGTGCATGGAATGGGCCTCATATCCGACAGTATCTATGAGGATGTAGAAACTTCCTGCAAGGGAAACTTCTACAAATATTACTCTGAGGATGCTGAAGATAATAATAATGATGATTCATGCAGTAAGAGCTTTGAAAAAGTTGATAGGGCTATCGACGGCCTTAACGTGTATGATATATTGGAACCATGTTACCATGAAGGAGATTCAAATTCAGCATGGATAAAAGCAGCCATTGCTAATGGAACATTGCCAAAGAGTTTTCAAGAATTAGGGTTCACTAATAATAATGATGAGAGGCATCTCAAAGTGAGGAAGAGGATGTTTGGTAGAGCTTGGCCTTTTAGGGCACCTCTCAAACAAGGCCTTGTTCCTTTATGGCCCCAATTATTGGCTCAAACCAGACATGTTGCTTGTGTTAGTGATGTAGTTGCAAGTTCATGGCTAAACAACAATGCAGTAAGGAAAGCCATTCATGCTGAGGAGGAAAGTGTGACAGGGGCATGGGAATTATGCACCGGAAAGATAGAATACAGTCATGATGCTGGAAGCATGATTCCTTACCACAAGAACCTAACTGCCCTTGGTTATAGGGCACTTATTTTCAGTGGAGACCATGATATGTGTGTTCCATTTACCGGAAGTGAAGCATGGACTCGCTCACTTGCATATAACATTATTGATGAATGGAGACCGTGGAACTCCAATGGCCAAATTGCTGGGTACATTGGAGCTGGGCACACAGTGCCAGAGTATAAACCACGTGAGGCACTTGATTTTTACACTCGTTGGTTGGAAGGAAGACCAATATAA 1335 0.4157 MANNSILSSSLICCLLFLLLNHHYWIFVEAAPSGSLVTQLPGFDSNFPSNHYSGYINIDGNGENGKNLFYYLVSSERNPKKDPLVLWLNGGPGCSSFDGFVYEHGPFNFEAAKSKGSLPTLHTNPYSWSKVSNIIYLDSPAGVGLSYSKNSTKYGYMVGNGVTDEIFDGNALLPFVHGMGLISDSIYEDVETSCKGNFYKYYSEDAEDNNNDDSCSKSFEKVDRAIDGLNVYDILEPCYHEGDSNSAWIKAAIANGTLPKSFQELGFTNNNDERHLKVRKRMFGRAWPFRAPLKQGLVPLWPQLLAQTRHVACVSDVVASSWLNNNAVRKAIHAEEESVTGAWELCTGKIEYSHDAGSMIPYHKNLTALGYRALIFSGDHDMCVPFTGSEAWTRSLAYNIIDEWRPWNSNGQIAGYIGAGHTVPEYKPREALDFYTRWLEGRPI 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03014 444 Gene3D alpha/beta hydrolase 30 154 IPR029058 -
Aip04g03014 444 Gene3D alpha/beta hydrolase 155 263 IPR029058 -
Aip04g03014 444 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 155 442 IPR001563 GO:0004185|GO:0006508
Aip04g03014 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Aip04g03014 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 411 424 IPR001563 GO:0004185|GO:0006508
Aip04g03014 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Aip04g03014 444 Pfam Serine carboxypeptidase 155 441 IPR001563 GO:0004185|GO:0006508
Aip04g03014 444 Pfam Serine carboxypeptidase 41 153 IPR001563 GO:0004185|GO:0006508
Aip04g03014 444 Gene3D - 310 444 - -
Aip04g03014 444 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 25 154 - -
Aip04g03014 444 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 155 442 - -
Aip04g03014 444 SUPERFAMILY alpha/beta-Hydrolases 37 443 IPR029058 -
Aip04g03014 444 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 154 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03014 Aip-Chr4 123050385 123057986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03014 318 444 Calmodulin-binding Proteins AT2G22960 47.143 2.56e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03014 K16296 - tcc:18599310 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03014 04 123050385 123057986 Aip02g00193 02 2859416 2861986 PCT