Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03013 ATGGGGTCCTGCTTCTCTGTGGAAAGCAGGAACCCCAATTCACCATCTTCAGGATTGAGGAAGAGGAAGAATTCCAAGAAGAGGTTTGGATCAAGAAACTCTTCATTTGAGTATTGGAGGAATGAGCCTCTCCATAGGGTCCCTGGTAGGATCTTCCTCAATGGCTCTACCCAAGTTGCTTCCTTGTTCACCCAGCAAGGAAAGAAAGGCACCAATCAAGATGCCATGATTGTTTGGGAGAACTTTTGTTCCAGGCAAGATACTGTTTTCTGTGGTGTTTTCGATGGCCACGGTCCATTTGGTCACATGGTTGCGAAAAAAGTGAGGGATGTTCTTCCTCTAAAACTGAATGCTCATTGGGAACCTAATGCATCTGGTGATGATGTCCTCAAGGAGATTAGCGTGAATACGGCAGTAAGCATGAACACAGAAGAGGCTGCATTTGTATCCGCTGACGAGGAATCCAGAGCATCCATTGATGTCGAAGAATTGGAAAAATACCCTGAAATCTTTCAAACAGTTAGAGAGTCTTTTCTGAAGGCCTTCAAAGTTATGGATAGAGAATTGAAGACACACCCTAGCGTCGATTGCTTCTGCAGTGGAACAACAGCAGTAACATTGGTGAAACAGGGTCGTGATCTTATTGTCGGAAATGTTGGTGATTCCAGAGCTGTGCTTGGTACAAGAGAGAAAGATAATTCTCTTGTTGCAGTTCAGTTAACTGTGGATCTAAAACCCAATCTTCCAGCCGAAGCAGAGAGAATTCGTAGATGCAAAGGGCGTGTTTTTGCCCTTCATGATGAACCTGAAGTTGCTCGAGTCTGGTTGCCAAATAACGATTCCCCCGGCCTAGCCATGGCTCGTGCATTCGGAGATTTTTGTCTTAAAGATTTTGGTTTGATATCTGTTCCAGAGGTTTCATACCGAAGACTCACCGAGAAGGATGAGTTTATCGTCTTAGCAACCGATGGGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTAGACATCGTAGCAGCAGCACCTGCACGGTCCATGGCAGCTCGAGCGCTGGTCGAGTCAGCTGTTAGAGCTTGGAGGTACAAATATCCGACTTCCAAGGTTGATGACTGTGCAGTGGTTTGCCTCTTTCTGGACCCGGACTTGCATAAAGTATCTAATGCTTCCTATGCTAAGTCCAAAGAGCAGCAGAGTTCAGGGATCAATGCAAACGGCGGCAGCGAAGAAGTGGAAAGCCTTCTGGAACCTGCCGGTCTGGTAAGGTCCGGAACTTGCAGGGAAGTCAATAATGACACATCCAATGGCGAAAGCAACGAAGAAACGTTGAAAGATGATGTGATGGATGCTGGAGAGTGGTCTGCACTCCAAGGAGTGACTCGAGTGAACACACTGTTGAATCTACCGAGATACGACCCTCGCAAAGATAAGGGTGTGTCCGCCAGCCCGAAAAAACGCaaatga 1461 0.4648 MGSCFSVESRNPNSPSSGLRKRKNSKKRFGSRNSSFEYWRNEPLHRVPGRIFLNGSTQVASLFTQQGKKGTNQDAMIVWENFCSRQDTVFCGVFDGHGPFGHMVAKKVRDVLPLKLNAHWEPNASGDDVLKEISVNTAVSMNTEEAAFVSADEESRASIDVEELEKYPEIFQTVRESFLKAFKVMDRELKTHPSVDCFCSGTTAVTLVKQGRDLIVGNVGDSRAVLGTREKDNSLVAVQLTVDLKPNLPAEAERIRRCKGRVFALHDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVAAAPARSMAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDPDLHKVSNASYAKSKEQQSSGINANGGSEEVESLLEPAGLVRSGTCREVNNDTSNGESNEETLKDDVMDAGEWSALQGVTRVNTLLNLPRYDPRKDKGVSASPKKRK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03013 486 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 466 - -
Aip04g03013 486 MobiDBLite consensus disorder prediction 1 19 - -
Aip04g03013 486 Gene3D - 54 379 IPR036457 -
Aip04g03013 486 ProSiteProfiles PPM-type phosphatase domain profile. 59 378 IPR001932 -
Aip04g03013 486 SUPERFAMILY PP2C-like 52 379 IPR036457 -
Aip04g03013 486 CDD PP2Cc 58 378 IPR001932 -
Aip04g03013 486 SMART PP2C_4 48 376 IPR001932 -
Aip04g03013 486 PANTHER ALPHABET, ISOFORM E-RELATED 1 466 - -
Aip04g03013 486 Pfam Protein phosphatase 2C 172 357 IPR001932 -
Aip04g03013 486 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03013 Aip-Chr4 123046014 123049460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03013 1 474 PP2C-type Phosphatase Gene Family AT3G02750 61.495 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03013 - - gmx:100790373 761.911