Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02967 ATGGTTTCTTTGTCAACGAACCCCTTCTTTTCTCTAACCACCCAAAACGCTGCGTCTCGTTCTTCTTCTTCTTTGTATTCGAGATTCGCGGCTTCAACCAAGTTCAATTCTTTCCACGCAAATAATAAAGATCATAGAAAGGTTGTTTGTGCTTGCGTCGCTCCTCCAACGAACTTCAAGAGCGAAGACTCTTCCGCGCTCAGATTCAATGGTTCATCGAAATCGGAGCAATTGAGCACACTTCGGGAACAAGATGGTGACTCTGATGTTCTTATTGAGTGTAGAGACGTCTACAAGTCATTTGGGGAAAAGAAAATCCTCAATGGTGTTAGCTTCAAGATTAGACATGGGGAAGCAGTTGGAATAATTGGTCCTTCTGGGACTGGAAAATCCACAGTTTTAAAGATTATTGCAGGATTACTTATTCCAGATAAGGGTGAAGTTTATATTCGAGGTAGAAAGAGAGTTGGTCTGGTAAGCGATGATGAGCTACATGGTCTTCGCATTGGATTAGTGTTCCAAAGTGCAGCACTTTTTGATTCTTTGACTGTCCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGCATGCCTGAGGACCAGATATCAGAGGTTGTCAAGGAAACCTTGGCTGCTGTTGGATTGAAGGGAGTTGAGAATCGGTTGCCTTCTGAGTTATCAGGTGGAATGAAAAAACGAGTTGCTTTAGCTCGATCTATTATTTATGACAATTCAAAGGATTCAATTGAGCCTGAGGTTCTCTTATATGATGAACCAACTGCTGGACTAGATCCCATTGCATCAACTGTTGTTGAGGATCTAATTCGTTCAGTGCACATAAAAGGACAAGATGCACGTGGGAAACCCGGGAACATTGCATCATATGTGGTCGTCACTCACCAACATAGTACCATTAAAAGAGCCATTGACAGGTTGGTGTTTCTACACAAGGGAAAGATTGTTTGGGAAGGAATGACTCATGAATTTACAACATCAACAAATCCAATTGTTCAACAGGTAAGTGAACACAAATTGAGTTGTTTAAGAATTCGGAGTCTAGGGGCTATAAATATGTAA 1080 0.412 MVSLSTNPFFSLTTQNAASRSSSSLYSRFAASTKFNSFHANNKDHRKVVCACVAPPTNFKSEDSSALRFNGSSKSEQLSTLREQDGDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLIPDKGEVYIRGRKRVGLVSDDELHGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEDQISEVVKETLAAVGLKGVENRLPSELSGGMKKRVALARSIIYDNSKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGQDARGKPGNIASYVVVTHQHSTIKRAIDRLVFLHKGKIVWEGMTHEFTTSTNPIVQQVSEHKLSCLRIRSLGAINM 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02967 359 CDD ABC_Org_Solvent_Resistant 92 340 - -
Aip04g02967 359 Gene3D - 79 350 IPR027417 -
Aip04g02967 359 ProSitePatterns ABC transporters family signature. 227 241 IPR017871 GO:0005524
Aip04g02967 359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 333 IPR027417 -
Aip04g02967 359 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 92 343 IPR003439 GO:0005524
Aip04g02967 359 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 16 345 - -
Aip04g02967 359 SMART AAA_5 116 320 IPR003593 -
Aip04g02967 359 Pfam ABC transporter 107 262 IPR003439 GO:0005524
Aip04g02967 359 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 16 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02967 Aip-Chr4 122443512 122447759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02967 98 336 Calmodulin-binding Proteins AT2G36910 28.800 1.97e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02967 - - adu:107486109 650.588