Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02954 ATGTTACCCATGGCTTCCCATGTTGCTTTTCCTCATGCTTCTCCTCTTTCTCTCTCTATTCCCAACAAACGATTCAGTTACAAACAGCTTCACATAAATGGAATCAAATCCATCACTACTTTCTCTTCATCTTCTTATTATTCTTCTTCTTGTTGGTGCTTCCGTTCACTTTCTACACAAAGAGGGTATTGTTTACCTGTGATTGCATGTTCCTCTTCCAATGGAAGGGGCCCTAATAGTTCTAAGGACGATGATGGTGTCAAGAATGTTGAGAAGCTTCTTGAGGAGAAAAGAAGAGCTGAATTGTCTGCTAGAATTGCCTCAGGTGAATTCACAGTGAAGCAGCAATCTGGTTTAAGTTCTATGTTGAAGAAGAGCTTGTTAAAGGTGGGGGTGCCCAAAGAGGTTGTGGGGTTTTTGCTCGGTTGGGCGGCAGGGGAAGGTGATTACCCCGAAATTCCTGAGGCAAAAGGATCTGTCAAGGCTATTAGAAGTGAGGCATTCTTCATTCCATTGTATGAACTTTACCTCACATACGGTGGAATTTTCAGGTTGACTTTTGGACCAAAGTCCTTTTTGATTGTATCTGATCCGTCTATAGCGAAACACATCTTGAGAGACAATTCAAAGGCTTATTCGAAGGGTATCTTGGCTGAGATCCTAGAGTTTGTAATGGGGACAGGGCTCATCCCGGCTGATGGGGAAGTGTGGCGAGTTCGACGACGAGCTATAGTCCCAGCATTGCATCTGAAGTACGTAGTGACGATGATTAGCCTTTTTGGACAAGCCACAGATAGGCTCTGCAAGAAGCTAGATGATGCTGCATCTGACGGGGAAGATGTTGAGATGGAATCACTTTTCTCTCGATTGACCTTGGACATCATTGGAAAGGCAGTATTCAATTATGATTTCGACAGTTTAACAAATGATACCGGTATAGTTGAGGCTGTATATACTGTACTGAGAGAAGCAGAAGATCGAAGCGTTTCTCCGATTCCAGTATGGGAGATCCCAATATGGAAAGACATATCACCGCGTCAAAGGAAGGTTTCTGCTGCTCTTAAATTGGTCAATGATACACTTAATGAGCTGGTAGCAATATGCAAGAGAATGGTGGACGAAGAAGAGTTACAGTTTCACGAGGAGTACATGAATGAGCAAGATCCAAGTATTCTGCATTTCTTGTTGGCATCAGGAGATGATGTGTCGAGTAAGCAACTCCGCGATGATTTAATGACAATGCTCATCGCTGGACATGAAACTTCAGCTGCTGTTTTAACTTGGACCTTCTATCTTCTATCAAAGGTTGACTCCGTACTAGGGGATCGATTTCCAACGATCGAAGACATGAAGAAACTCCGATATACAACCCGAGTGATCAATGAGTCAATGAGGCTTTACCCTCAACCACCAGTGTTGATCCGTCGCTCTCTTGAGAATGATATGCTCGGCGAGTATCCTATAAACAGAGGTGAAGATATCTTTATATCTGTCTGGAACCTGCATCGTAGTCCAAACCTATGGGATGAAGCTGATAAGTTTCAACCAGAAAGATGGCCAGTAGATGGACCTAACCCCAATGAGACAAATCAAAACTTCAAGTATCTTCCTTTTGGGGGAGGACCGAGGAAATGTGTTGGTGATTTGTTTGCTTCATATGAGACCATAGTAGCACTTGCCATGCTTGTTAGACGGTTCAACTTTCAAATGGCAGTTGGAGCCCCACCGGTTGAGATGACTACTGGAGCAACAATTCATACAACACAAGGGTTGAAGATGACAGTTACACGCAGAATAAAACCTCCAATCGTGCCCTCATTACAAATGTCAACTAAGGAAATTGATCCATCCATGAGCAAAGATGACACAAGTCAGAAAGGCGAAGTTTATCAGGCTCAGTCCTAA 1905 0.4331 MLPMASHVAFPHASPLSLSIPNKRFSYKQLHINGIKSITTFSSSSYYSSSCWCFRSLSTQRGYCLPVIACSSSNGRGPNSSKDDDGVKNVEKLLEEKRRAELSARIASGEFTVKQQSGLSSMLKKSLLKVGVPKEVVGFLLGWAAGEGDYPEIPEAKGSVKAIRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGTGLIPADGEVWRVRRRAIVPALHLKYVVTMISLFGQATDRLCKKLDDAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVSAALKLVNDTLNELVAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSVLGDRFPTIEDMKKLRYTTRVINESMRLYPQPPVLIRRSLENDMLGEYPINRGEDIFISVWNLHRSPNLWDEADKFQPERWPVDGPNPNETNQNFKYLPFGGGPRKCVGDLFASYETIVALAMLVRRFNFQMAVGAPPVEMTTGATIHTTQGLKMTVTRRIKPPIVPSLQMSTKEIDPSMSKDDTSQKGEVYQAQS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02954 634 SUPERFAMILY Cytochrome P450 165 598 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02954 634 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 538 547 IPR017972 GO:0005506|GO:0016705
Aip04g02954 634 Gene3D Cytochrome P450 153 608 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02954 634 PANTHER CYTOCHROME P450 FAMILY 4 104 602 - -
Aip04g02954 634 MobiDBLite consensus disorder prediction 605 634 - -
Aip04g02954 634 PRINTS E-class P450 group I signature 457 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02954 634 PRINTS E-class P450 group I signature 176 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02954 634 PRINTS E-class P450 group I signature 535 545 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02954 634 PRINTS E-class P450 group I signature 545 568 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02954 634 PRINTS E-class P450 group I signature 497 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02954 634 PRINTS E-class P450 group I signature 406 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02954 634 PANTHER - 104 602 - -
Aip04g02954 634 PRINTS P450 superfamily signature 417 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02954 634 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02954 634 PRINTS P450 superfamily signature 545 556 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02954 634 PRINTS P450 superfamily signature 536 545 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip04g02954 634 Pfam Cytochrome P450 172 581 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02954 Aip-Chr4 122313948 122318631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02954 85 611 Cytochrome P450 AT1G31800 78.558 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02954 K15747 - gmx:100780770 1003.82