Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02944 ATGGAGCTTCACTACTATCTCTACATTCTCTCAATAAACCTATGCTTCTTGTTATTTTTACCTGAATCACTCTATTCCCAACAAGTGTACCTAAATGGAACAGTTTATGATTGCAGTGATACCCCTTCTACACCAAAAGGGTACCTTTGCAATGGCCTCAAGAAATCGTGCACGTCATTCATTGTTTTCAGGTCCAAACACCCTTATGATAACCCTGCAAGCATTGCATACCTTCTTGACTCTGAAGCATCAATCATAGCCTCAATCAACAAGCTCTCAAACAATGCAAGAATCCCTTCTAACAGACCCATCATTGTTCCTGTTTTCTGTTCATGTCATGGAAATATATATAGCCATGATGCTTCTTACACTGTCAAGAACAATGACACATACTTTGAATTGTCCATAGGAGAATCTTATGGTGTTGGTGAACAAAGTATGTTAGAGGCTAATGAGCCACAAAATAAAAATAGTAGCAGCTTCACCCTCTTGGCCTTGACACCTATCTTGGTTCCTCTAAGAGGAAAGAGTTGCAAAGAGGATCCAAATAGTTTCTATTGTAACTGTTCTAAGGAATTTCTTGCTGATGGAAGCTTAAAGGGGATTTATTGTGATGAGTCTGATGGTCAAAAATTCCCTGCCAAATTGGTTGTTTGCATTGGTGTTAGCATTGGTGTAGGCTTTCTTTGTTTCTTTCTCTTGGGTTATAAACTATACCAATACATACAGAAAAAGAGAGAAAGGATTCACAAGGAAAAGCTATTCAAACAGAATGGTGGCTACTTGTTACAAGAGAAAGTGTCATCATCACTTGGAAATGGATCCCAAAAGGTAATAATAAAGCTTTTCACAGCTGAGGAGCTTCAAAGAGCAACAGATAACTACAACTGGAGCAGGTTTCTTGGTCAAGGTGGATATGGAAAAGTCTACAAAGGAATGCTACCTGATGGAACCATAGTAGCTGTTAAGAGATCTAAAGAGATTGAGAGGAACCAGATTGAGACTTTTGTCAATGAAGTTGTCATTTTATCACAGATTAATCACAGGAACATTGTGAAGCTCTTGGGGTGCTGTCTTGAGACAGAAGCACCATTACTAGTCTATGAGTTCATTCCTAATGGAACACTTGCACAACATATTCATAACAAACACCATGAATCATCTTCACCACTTTCATGGGATAGCCGGCTTCGAATTGCATGCGAGGTAGCCGGAGCAGTGGCTTATATGCATTCTTCAGCTTCAATTCCCATCTTCCATAGAGATATCAAACCTACTAACATACTCTTAGATAGTAACTATAGTGCAAAAGTGTCTGATTTTGGAACATCAAGATCATTGCCACAAGACAAAACTCACTTGACAACACAAATAGGAGGAACTTTCGGATACATCGACCCTGAATATTTCCAATCTAGTCAATTTTCGGATAAGAGTGACGTATATAGTTTTGGAGTTGTGCTTGTTGAAATCATAACTGGGAAGAAGCCGATTTCATTTATAGAAGAAGATGAGGGTCAGAATTTGATTGCTGAATTCATTTCTGTGATGAAGGAGAACAAAGTTTGTGATATCTTGGATCCCAAGGTATTGAAGGAAGCTAAGAAGGATGAGATTGTTGCAATTTCAAATCTTGCAATGAGGTGTTTGAGGCTAAATGGGAAAAAAAGGCCAACAATGAAAGAGGTTTCAGCTGAGTTGGAATCATTGAGGAAGGTACAAAGTTCCATGTTGGTTGATAACCATGATCATCATCATGATGAATCAACAAACAATGATGAAAAATTATTGCATAAACACAACAATAGTGTAGTACAAGAATATGCAGAGGAGAGCATTTTGCTGTCATTACAATTACAAATGGAGTCCTCATCCTTCTAA 1881 0.3817 MELHYYLYILSINLCFLLFLPESLYSQQVYLNGTVYDCSDTPSTPKGYLCNGLKKSCTSFIVFRSKHPYDNPASIAYLLDSEASIIASINKLSNNARIPSNRPIIVPVFCSCHGNIYSHDASYTVKNNDTYFELSIGESYGVGEQSMLEANEPQNKNSSSFTLLALTPILVPLRGKSCKEDPNSFYCNCSKEFLADGSLKGIYCDESDGQKFPAKLVVCIGVSIGVGFLCFFLLGYKLYQYIQKKRERIHKEKLFKQNGGYLLQEKVSSSLGNGSQKVIIKLFTAEELQRATDNYNWSRFLGQGGYGKVYKGMLPDGTIVAVKRSKEIERNQIETFVNEVVILSQINHRNIVKLLGCCLETEAPLLVYEFIPNGTLAQHIHNKHHESSSPLSWDSRLRIACEVAGAVAYMHSSASIPIFHRDIKPTNILLDSNYSAKVSDFGTSRSLPQDKTHLTTQIGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVEIITGKKPISFIEEDEGQNLIAEFISVMKENKVCDILDPKVLKEAKKDEIVAISNLAMRCLRLNGKKRPTMKEVSAELESLRKVQSSMLVDNHDHHHDESTNNDEKLLHKHNNSVVQEYAEESILLSLQLQMESSSF 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02944 626 CDD STKc_IRAK 301 570 - -
Aip04g02944 626 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Aip04g02944 626 ProSiteProfiles Protein kinase domain profile. 295 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02944 626 Gene3D Transferase(Phosphotransferase) domain 1 371 596 - -
Aip04g02944 626 Gene3D Phosphorylase Kinase; domain 1 262 370 - -
Aip04g02944 626 PANTHER LYSM TYPE RECEPTOR KINASE 26 134 - -
Aip04g02944 626 SUPERFAMILY Protein kinase-like (PK-like) 274 567 IPR011009 -
Aip04g02944 626 Pfam Protein kinase domain 297 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02944 626 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 134 598 IPR045274 GO:0007166
Aip04g02944 626 PANTHER LYSM TYPE RECEPTOR KINASE 134 598 - -
Aip04g02944 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Aip04g02944 626 SMART serkin_6 295 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02944 626 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 134 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02944 Aip-Chr4 122231179 122233640 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02944 211 571 Receptor kinase-like Gene Family AT1G16130 55.525 6.09e-140 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aip04g02944 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02944 - - adu:107485803 796.578