Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02943 ATGGAACCTAGCTTTGTCTATTCACTTAAATTAATCTTGTTCCTTATCATCATCACTACTCCATGGTTTCTATTGTCCCTTCATGGCTATAATAATAATGTTGATGAGAGTTCAACTTATTCTACATACATAGTCCATATGGACAAATCTCAATTTCCTAACATATTCACAACCCACCATGATTGGTTTGAGGCCACAATTCAATCTTCAAAACCATCCTTTCACATATCAAATAGTAATAAAAGACCATCAAAAAAACAATTATTGTACTCATATAATCATGCAATGTATGGTTTTAGTGCAACCTTATCTTCAGAAGAGTTAAACTCTCTTAGAAACTCATATGGATTTATTTCAGCATATCCTGATAGAACCGCCACAATGGACACAACACACACCTTTGAGTTTCTCTCTTTAGACCCTTCTTTTGGGCTATGGAATGCTTCAAACCTTGGTGAGGGTGTGATTGTGGGTGTGATTGATAGCGGGGTGTGGCCTGAGAGTGAGAGCTTCAAAGATGATGGAATGGAAAAGAAGCTTCCATTGAAATGGAAAGGGACATGTGAGGAAGGTGAAGAGTTCAATGCCTCCATGTGCAACTTGAAGCTCATTGGTGCAAGGTATTTCAACAAGGGTTTGGTTGCTGCAAAACCTAATGTCACAATCAAGATGAACTCACCTAGGGATTATGATGGACATGGAACTCACACATCATCCACTGTTGCTGGAAACTATGTTCATGGTGCCAATTTCTTTGGCTATGCCAAAGGTGTGGCTAGAGGCATTGCACCAAGGGCTAGGGTTGCCATATACAAGGTATCTTGGGAGGAGGGTCGTCAGGCTTCTGATATATTGGCCGGAATGGACCAAGCAATTGGTGATGGAGTTGATGTGATTTCAGCTTCAATGGGGCTTGATAAAGTTCCACTATATGAGGACTCCATAGCCATAGCTTCTTTTGCAGCAATGGAGAAAGGCATTGTTGTTTCATCTTCTGCAGGTAATGAAGGTCCAAAGCTTGGAACTTTACACAATGGAATCCCTTGGGTTATAAATGTGGCTGCAAGCTCCATTGATCGTACATTTGGTAGCTTGGTTCTTGGAAATGGTGAAACCATCATTGGTTGGACATTGTTTGCAGCAGATGCTATTGTTCAAGATCTTCAACTTGTTTATGATGACACTTTATCAGCTTGCAACTCTTCGCACATGTTAAGTGAGGTTGTTGCTGCCACATCTGATGGGATCATTGTATGCAAGGCCAGCAATTCAATTTCTGTGTTTGATCAAATAAAATTAGTGACTATGACGAATGTAAAAGGAGCAGTGTTCATCTCAGATGATCCTGAACTAACTGAATGGGGACATCTCTATTCTCCTAGCATTGTAATTACTTCTAAAGATGCAAAATCTGTGATCAATTATGCACAGAGCAACAAGAATCCAAAAGCCACCATCAATTTTCAACAAACATTTCTTGGAATCAAGCCATCACCGGTTGCTGCACATTATAGTTCAAGAGGACCTTCACCTAGTTTTCCATGGATCTTAAAACCTGATATAATGGCACCAGGAACTAGGGTTTTAGCTGCTTATATTCCTCACAAAACAACAGCAACAATTGGCACAAATGTCTTCCTTTCAAGTCACTATAATATTCAATCCGGAACTTCAATGGCTTGCCCTCATGTTTCTGCGGTTGCGGCACTTCTTAAAGCAGCACGTCCCGAATGGGGCGTTGCTGCTATTAAGTCAGCAATAATGACTACTGCTAATTTTCTCGATAACACAGAGAATTTAATTAGGGATAATGCTAACCCTAATGAATTTGCTTCACCTCTTGCAATTGGAGCTGGTGAGATTGATCCTAATAGAGCACTTGATCCAGGTTTGGTATATGATGCTACCCCACAAGATTATGTTAATCTCCTTTGTGGTTTGAACTATAGTTATGACCAAATATTAACAATTACTAGGTCAAGATCCTATGATTGTTCAAACCCATCACTTGATCTTAATTACCCTTCATTTATAGTTTTCTATAGCAAGGAATCAGAATCAGTGATTCACAAATTTAGGAGGACAGTGACTAATGTTGGAGAGGGTGGGGCTACATATAGGGTTAAGGTGAGAGAACCAATGGAGTCTATGGTCACAGTGTTACCTAATACATTGGTATTCAAAGATAAGAATGAGAAGCAGAGTTATGAGGTTCACATAATGTATGTGAAGAAGGACAATAAAAGTAATAATAATGTGTCGTTTGGGGACATTGTTTGGGTTGAAGATGGTGGAAAACACACAGTTAGGAGCCCTATTGTTGTCGCACCAAGTGGAATTGTATGA 2346 0.396 MEPSFVYSLKLILFLIIITTPWFLLSLHGYNNNVDESSTYSTYIVHMDKSQFPNIFTTHHDWFEATIQSSKPSFHISNSNKRPSKKQLLYSYNHAMYGFSATLSSEELNSLRNSYGFISAYPDRTATMDTTHTFEFLSLDPSFGLWNASNLGEGVIVGVIDSGVWPESESFKDDGMEKKLPLKWKGTCEEGEEFNASMCNLKLIGARYFNKGLVAAKPNVTIKMNSPRDYDGHGTHTSSTVAGNYVHGANFFGYAKGVARGIAPRARVAIYKVSWEEGRQASDILAGMDQAIGDGVDVISASMGLDKVPLYEDSIAIASFAAMEKGIVVSSSAGNEGPKLGTLHNGIPWVINVAASSIDRTFGSLVLGNGETIIGWTLFAADAIVQDLQLVYDDTLSACNSSHMLSEVVAATSDGIIVCKASNSISVFDQIKLVTMTNVKGAVFISDDPELTEWGHLYSPSIVITSKDAKSVINYAQSNKNPKATINFQQTFLGIKPSPVAAHYSSRGPSPSFPWILKPDIMAPGTRVLAAYIPHKTTATIGTNVFLSSHYNIQSGTSMACPHVSAVAALLKAARPEWGVAAIKSAIMTTANFLDNTENLIRDNANPNEFASPLAIGAGEIDPNRALDPGLVYDATPQDYVNLLCGLNYSYDQILTITRSRSYDCSNPSLDLNYPSFIVFYSKESESVIHKFRRTVTNVGEGGATYRVKVREPMESMVTVLPNTLVFKDKNEKQSYEVHIMYVKKDNKSNNNVSFGDIVWVEDGGKHTVRSPIVVAPSGIV 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02943 781 Pfam Fibronectin type-III domain 671 775 IPR041469 -
Aip04g02943 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Aip04g02943 781 SUPERFAMILY Subtilisin-like 129 631 IPR036852 GO:0004252|GO:0006508
Aip04g02943 781 ProSiteProfiles Serine proteases, subtilase domain profile. 133 627 - -
Aip04g02943 781 Gene3D - 359 493 - -
Aip04g02943 781 Pfam Peptidase inhibitor I9 42 126 IPR010259 -
Aip04g02943 781 PRINTS Subtilisin serine protease family (S8) signature 152 171 IPR015500 -
Aip04g02943 781 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
Aip04g02943 781 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Aip04g02943 781 Gene3D - 644 777 - -
Aip04g02943 781 Gene3D Peptidase S8/S53 domain 154 640 IPR036852 GO:0004252|GO:0006508
Aip04g02943 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 128 IPR037045 -
Aip04g02943 781 CDD Peptidases_S8_3 127 592 IPR034197 -
Aip04g02943 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 776 IPR045051 -
Aip04g02943 781 CDD PA_subtilisin_like 364 486 - -
Aip04g02943 781 Pfam Subtilase family 152 599 IPR000209 GO:0006508|GO:0008236
Aip04g02943 781 PANTHER OS01G0868800 PROTEIN 42 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02943 Aip-Chr4 122224868 122227921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02943 19 776 Subtilisin-like Serine Gene Family AT5G67360 41.762 1.18e-178 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02943 - - gmx:100806072 1043.49