Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02937 ATGGAAAACCAAGACCCACCAAATCCTCCACCACCACCATTATTACTATTGCCAACACCCCAAGATAACCACCACAACAACAATATTCCATTTTTACCCTTCACACTGCCTACTTCCATGCTTCATCAAAACCCTTTGCAAATGGAACCTCAATCCTATCCTAATGATAATAACAATAATAATAATAATAGCCTTGGTTGTGACATCAATGATGACTATTATTGGAGCAACATTAGTTATGTTTTCTCCGGCGGCGGCACTGGCCAGAACAACGTTAGTGATACCAAGGAAACAATAACGACCGCAATGGAATGCGGTTCTTCTTCTCTTCGTCCTTCTTTCAATATGGCCGAAAATGTTGTCCGAACTCGTGCAATAGAGAAAAATGAGGAGAAAGAGAAGAAGAATATAGTTGGAAGAATGAAGAAGGCAACAAGAGTGGCAAGGTTTGCATTCCAAACAAGAAGTGTTGATGATATATTGGATGATGGTTACCGCTGGAGGAAGTATGGCCAGAAAGCAGTGAAGAATAGCACATATCCTAGAAGCTACTACCGTTGCACGCATCACACATGCAATGTGAAGAAACAAGTGCAGAGGCTATCGAAAGACACAAGCATTGTGGTGACAACTTACGAGGGAATTCATAACCACCCTTGCGAGAAGTTTATGGAAACTTTGGCCCCTCTTCTCAAACAGATTCAGTTTCTTGCTACCATCTAA 723 0.4149 MENQDPPNPPPPPLLLLPTPQDNHHNNNIPFLPFTLPTSMLHQNPLQMEPQSYPNDNNNNNNNSLGCDINDDYYWSNISYVFSGGGTGQNNVSDTKETITTAMECGSSSLRPSFNMAENVVRTRAIEKNEEKEKKNIVGRMKKATRVARFAFQTRSVDDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKFMETLAPLLKQIQFLATI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02937 240 Pfam WRKY DNA -binding domain 162 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g02937 240 ProSiteProfiles WRKY domain profile. 156 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g02937 240 SUPERFAMILY WRKY DNA-binding domain 156 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip04g02937 240 Gene3D WRKY domain 146 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip04g02937 240 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 69 236 - -
Aip04g02937 240 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 69 236 IPR044810 GO:0003700
Aip04g02937 240 MobiDBLite consensus disorder prediction 1 18 - -
Aip04g02937 240 MobiDBLite consensus disorder prediction 1 29 - -
Aip04g02937 240 SMART WRKY_cls 161 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02937 Aip-Chr4 122129924 122132823 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02937 139 240 WRKY Transcription Factor Family AT1G64000 71.569 1.64e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip04g02937 WRKY 3.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02937 - - aip:107638083 456.447