Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02930 ATGGCGACAACAGTGCTCAATCGCAGTGCACTCCCCCAAGTACGGCGATGGTGCGATGCTCTCCACGACATACGTGGTGCTCAATCACGACAAACCCCTCTCCCTTCTCTTCTCCTTCTCGTTCTTCCTCTGTTCCTCCGTTTCCAGGCTTCTGCTAAGGTGATTGATGGGAAGTCAATGGCAAAGCAAATCAGAGCTGAGATAATAGTAGAAGTCTGTGACACAACCAACAAAATTAGAACCTATAGCGTTGCCTTGTGTGCCAAGTTTCACAATGTACCTCTTTATATGGCTGCACCACTGACTTCAATTGATCTGTCACTTTCTTCTGGAGAAGAAATCGTCATCGAGGAGAGATCTCCGAAGGAATTGTTGAACACGCTTGGAGAGCAAGTTGCTGCCTCATGA 408 0.4755 MATTVLNRSALPQVRRWCDALHDIRGAQSRQTPLPSLLLLVLPLFLRFQASAKVIDGKSMAKQIRAEIIVEVCDTTNKIRTYSVALCAKFHNVPLYMAAPLTSIDLSLSSGEEIVIEERSPKELLNTLGEQVAAS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02930 135 SUPERFAMILY NagB/RpiA/CoA transferase-like 66 129 IPR037171 -
Aip04g02930 135 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 66 135 - -
Aip04g02930 135 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 66 135 - -
Aip04g02930 135 Gene3D - 54 135 IPR042529 -
Aip04g02930 135 Pfam Initiation factor 2 subunit family 66 132 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02930 Aip-Chr4 121887660 121890092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02930 50 134 Eukaryotic Initiation Factors Gene Family AT2G05830 59.091 5.65e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02930 K08963 - gmx:100799311 105.531