Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02929 atggtggagccgaggACAGAGAGTGCCCGAAGAGAGGAGACTGATGGAGGAGGAGTGCGACGTGAGGAAGGAGACGATGTTTACGTCACTGCCGCCAAATCTCACCACTGCTGCTGGAGCCTCTGGCCGTCGGGACCGCCTTTCTTACCACCGCTGATGAAGCTCATCGGAGTTGCTCAAAGGTTACTATCGCTCTACTTGGTTCTGTTGGAAGCTACGTTGCTGCGGGTGTGGTTGCCGAAAACTGCCGCCGGAACCCATGTCTTCTGGATTGGTCGGTTAGATGAAAAAGATGATGATGGCCGGTTTGCAAGTGGAGGGTGGAAAAGTGAGGATGGAAGGCTTAGCCGTGGCATCCAAATTTTCTTTACTGGTGCCAAATTGGCTATAAGTGAAACGTATCAAGGGACTGATTCTCAATTTCTGGATTCTGAAAAAGACACTTTCTGGGATGATGGCTCTACTGCTTCAACTGCTGTTTTGGTTGATAACCATCTCTATGTTGCTAATGTTGGAGATTCTGGGACTATAATATTAGCTGAAACACAGCTTCAAAATAAACAAAAAGAAAAAGAGAAGGGAAATGAAAACAGGGAAAGCAGGGAAAAGAGAGTGAAATCCGAGAAAACAGAGAGAAAGAGAGGGAAGAGCACCGGTGGAAGGGGAAGACGCACCAAAGCTGGTGAGCTGTTCCGCCGCTCTTCATCGCGGTTGAGGCTGTCACCGCCGCAGATGCATCTATGCCGTTGTGTGTCACCATTAGAGGAAGAGGAGCGCGAACCAGAGCCATGCAAGGGAGGAGCAGAGCGCGCGCAGGGGAGAAGCCACCACTGTCGTCGCATCTTGCCGCCGCTGCCACTGCTGAGGTCACCATCGTCGTCCTCACCGCAAGCAGAGTCACCGCCATCCATGGTGGAGCCGAGGAGAGAGAGTGCCCGAAGAGAGGAGACTTGTGGAGGAGGAGTGCGACGCGAGGAAGGAGACGATGTTTACGTCACTGCCACCAAATCTCACCACCGCTGCTGGAGCCTCTGGCCGTCGGGACCGCCTTTCTTACCACCGCTGATGAAGCTCATCAAAGTTGCTCGAAGGTTACCGTCGCTCTATTTGGTTCTGTTGGAAGCTGCGCTGCTGTGGGTGTGGTTGCCGAAAACTGCCGCCGGAACCCCTATCTTCTTGATTGGTCGGTTAGATGAAAAAGATGATGATGGCCGGTTTGCAAGTAGAGGGTGGAAAAGTGAGGATGGAAGGCTTAGCCGTGGGTATTCAAGCTTCAGATGGAAGAGAGTAACGATGGAGGATTTTTATGATATTAAAATATTGAAGATTGGTGGTCATTCAGTATGCTTATTTGGAATATTTGATGGTCATGGTAGTTCTCGTGCTGCAGAGTATTTGAAAGAGCATCTCTTTGATAATCTCATGAAGCATCCAAATTTTCTTTACTGGTGCCAAATTGGCTATAAGTGA 1470 0.4952 MVEPRTESARREETDGGGVRREEGDDVYVTAAKSHHCCWSLWPSGPPFLPPLMKLIGVAQRLLSLYLVLLEATLLRVWLPKTAAGTHVFWIGRLDEKDDDGRFASGGWKSEDGRLSRGIQIFFTGAKLAISETYQGTDSQFLDSEKDTFWDDGSTASTAVLVDNHLYVANVGDSGTIILAETQLQNKQKEKEKGNENRESREKRVKSEKTERKRGKSTGGRGRRTKAGELFRRSSSRLRLSPPQMHLCRCVSPLEEEEREPEPCKGGAERAQGRSHHCRRILPPLPLLRSPSSSSPQAESPPSMVEPRRESARREETCGGGVRREEGDDVYVTATKSHHRCWSLWPSGPPFLPPLMKLIKVARRLPSLYLVLLEAALLWVWLPKTAAGTPIFLIGRLDEKDDDGRFASRGWKSEDGRLSRGYSSFRWKRVTMEDFYDIKILKIGGHSVCLFGIFDGHGSSRAAEYLKEHLFDNLMKHPNFLYWCQIGYK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02929 489 Coils Coil 177 204 - -
Aip04g02929 489 PANTHER ALPHABET, ISOFORM E-RELATED 388 481 - -
Aip04g02929 489 MobiDBLite consensus disorder prediction 186 215 - -
Aip04g02929 489 SUPERFAMILY PP2C-like 415 480 IPR036457 -
Aip04g02929 489 Pfam Protein phosphatase 2C 129 200 IPR001932 -
Aip04g02929 489 PANTHER ALPHABET, ISOFORM E-RELATED 122 183 - -
Aip04g02929 489 Gene3D - 108 247 IPR036457 -
Aip04g02929 489 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 388 481 - -
Aip04g02929 489 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 122 183 - -
Aip04g02929 489 SUPERFAMILY PP2C-like 126 182 IPR036457 -
Aip04g02929 489 MobiDBLite consensus disorder prediction 1 23 - -
Aip04g02929 489 MobiDBLite consensus disorder prediction 186 238 - -
Aip04g02929 489 ProSitePatterns PPM-type phosphatase domain signature. 450 458 IPR000222 GO:0043169
Aip04g02929 489 Gene3D - 411 485 IPR036457 -
Aip04g02929 489 MobiDBLite consensus disorder prediction 254 323 - -
Aip04g02929 489 MobiDBLite consensus disorder prediction 306 323 - -
Aip04g02929 489 MobiDBLite consensus disorder prediction 254 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02929 Aip-Chr4 121597115 121600588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02929 381 481 PP2C-type Phosphatase Gene Family AT5G53140 63.725 1.37e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02929 K17506 - gmx:100805795 162.54