Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02923 ATGTCAATTTTCGATGGAGCATTCATGGACACAGAGCTCTCAAAGCGAACCTCAATCTTCGGCCTCCGCCTCTGGGTCGTCATCGGAATCCTCGTCGGAGTCCTCATCGTATTTACCCTCTTTCTTCTCTCCCTCTGCCTCACCTCCCGCCGCCACCGCCGCCGCCGAACCGTTGCCGGAAAATATTCATCCGCCGGAGCACCACCAGCCAAGGAGATCCAGGAGATAGTCCACCTCCCTGGACCACACATGCTCCGGCAGCCTCAGGCGCCGGCGCCGGTGCCAGAGATTCACGTTGACTTCGGAAAGGTGGAGCACCGTGTGGTGGTGCACTCTGATAACAACAACAACAGCAACAATAGAGGAGTGTCTAGCGGTGAGAGTAAAGGAACTGTTAGTGGCTGTGAAACGACATCGTCGTTTGGGAGTGGGAGTGTCGTTTTGGGGGTTGGTGGTGGTGGTGTTGGTGTGGGACCTGAGGTTTCTCATCTTGGTTGGGGAAGATGGTACACTTTGAGAGAACTTGAAGCTGCTACTAATGGATTGTGTGAAGAGAATGTGATTGGTGAAGGTGGTTATGGCATTGTTTATTCTGGCGTTCTAAGTGATGGTACCAAAGTTGCTGTCAAGAATCTCTTGAATAACAAGGGCCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGAGTTCGACACAAAAATCTTGTTAGGTTACTTGGCTATTGTGTTGAGGGGGCCTACAGGATGCTTGTGTATGAATATGTGAACAATGGGAATCTAGAACAATGGCTCCATGGGGATGTTGGACCTGTAAGTCCCTTGACATGGGATATACGCATGAACATCATCTTGGGAACTGCAAGAGGATTGGCATATCTTCATGAAGGTCTTGAACCAAAGGTTGTCCACCGGGATGTGAAATCGAGTAATATACTCATTGATCGCCAATGGAACTCTAAGGTTTCTGATTTCGGGCTCGCTAAACTTTTGTGTTCTGAGAATAGCTACATCACAACTCGAGTGATGGGGACATTTGGTTATGTTGCACCGGAGTATGCTTGCACCGGAATGTTGACCGAAAAGAGTGACGTTTATAGCTTCGGGATACTCATCATGGAGATAATTACCGGGAGGAGTCCTGTCGATTATAGTAGACCACAAGGAGAGGTTAACTTAATAGATTGGTTGAAGACTATGGTTGGGAATAGAAAAGCTGAAGAGGTAGTTGATCCTAAGCTCCCTGAGATGCCAACCTCCAAGGCCCTTAAACGTGCTATATTGATTGCCCTTCGTTGTGTTGACCCTGACGCGACAAAGAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCAGATGATCTGTTATTCCAACATGAACGAAAAACTGAGGGAGAATCTTCGCGTTCGCAACGACAAGAGCGCAAGGACTCAGATTTAGATAAGAGGATACCAGATGGAGGGATCACTGATCAAAGTGAAGATGATAGTAATAGAAATCACCAGCAGCATACTAGGTGGAGATGA 1536 0.4772 MSIFDGAFMDTELSKRTSIFGLRLWVVIGILVGVLIVFTLFLLSLCLTSRRHRRRRTVAGKYSSAGAPPAKEIQEIVHLPGPHMLRQPQAPAPVPEIHVDFGKVEHRVVVHSDNNNNSNNRGVSSGESKGTVSGCETTSSFGSGSVVLGVGGGGVGVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYSGVLSDGTKVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLEQWLHGDVGPVSPLTWDIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILIDRQWNSKVSDFGLAKLLCSENSYITTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLIDWLKTMVGNRKAEEVVDPKLPEMPTSKALKRAILIALRCVDPDATKRPKMGHVIHMLEADDLLFQHERKTEGESSRSQRQERKDSDLDKRIPDGGITDQSEDDSNRNHQQHTRWR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02923 511 MobiDBLite consensus disorder prediction 464 511 - -
Aip04g02923 511 MobiDBLite consensus disorder prediction 112 136 - -
Aip04g02923 511 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 502 - -
Aip04g02923 511 ProSitePatterns Protein kinases ATP-binding region signature. 188 210 IPR017441 GO:0005524
Aip04g02923 511 Gene3D Phosphorylase Kinase; domain 1 166 257 - -
Aip04g02923 511 SMART serkin_6 182 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02923 511 Gene3D Transferase(Phosphotransferase) domain 1 258 471 - -
Aip04g02923 511 PANTHER OS01G0323000 PROTEIN 1 502 - -
Aip04g02923 511 Pfam Protein kinase domain 185 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02923 511 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02923 511 CDD STKc_IRAK 188 454 - -
Aip04g02923 511 SUPERFAMILY Protein kinase-like (PK-like) 161 454 IPR011009 -
Aip04g02923 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02923 Aip-Chr4 121149418 121153948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02923 169 510 Trihelix Transcription Factor Family AT5G38560 45.042 2.82e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip04g02923 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02923 - - gmx:100800724 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02923 04 121149418 121153948 Aip02g00170 02 2633731 2636407 PCT