Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02920 ATGGGTCACGTTAAAAAATATTGCTTTCTTTGGAAAAAGGAGAACAAAGGTAAGCAAGAAAAGAAGGATGATGGTGGTAATAATCGCGTATCTTCTATTTTAGATGATCTTCTTACTGTTGATATTGTTGATTATGAGTACAAGGTCAATCTTGTTTCTGGTTATGAGTTCAGCTGGGTAATTGATAGTGGCGCCTCAATACATGTTACACCAAAGAAGGAGTTCTTCACTTCTTATACTCAAGGAGATGTTTGTCTTGAGACTAATATGGAAATGAAGCTGCTACTCAAAGATGTTAGACATGCTCCAGATGTTCGCTTGAATTTGGTTTCAGTTAAAAGGCTTGATAATGAAGGCTTTGTAAACACTTTCGGCTTTGGACAATGGAAGCTTACTAAAGGCAACTTAGTGGTGGCTCGAGAAAAATGTACTTCAAATTTGTATGTGATGCATGCCATGATTACAAAAGGTAGTGTGAATGCAATTGAAAGTAAAAAAGTTTGTAGCTTGTGGCACAGACGACTTGGTCATATTAGTGAAAAAAGACTTAATTTTTTGGTTCGAAATGATGCTCTTTCCGGTTTGAAGAATGCAGAGTTGGAGAAATGTTCTCATTGCATGGCTGGCAAACAAAGAAGATTATCCTTCAAGAAGCATCAACCTTCAAGAAAATCAGACTTCTTGGAATTGGTGCACTCCGATATTTGTGGTCCTTTGAAGCAGCGAAGAGATATGGCTCTTGAGTCAGCTCCTTCTTTAGCTGACCACAACAACATTCGAGGAATTCCAACTCATGGTGGACGCTATGTTCAGTACAATATCTATGGCAACCTCTTTGAGGTTTCAAGGAAGTATGTTCCCCCCATACGCCCTGTGGGAAGAGGAGCTTATGGTATTGTTTGTGCTGCTGTGAATGCGGAGACACGTGATGAAGTTGCCATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCCAAAAGGACCTTACGCGAAATTAAACTTCTCCGTCACATGGATCATGAAAATGTGATAGCCCTTAAAGACATTATAAGACCACCACAGAAGGAGAACTTCAATGATGTGTATGTTGTTTATGAGTTAATGGATACCGATCTGCATCAAATAATTCGTTCCAATCAACCATTGACCGATGATCATTGTCGGTATTTTTTGTATCAGTTGTTACGAGGACTCAAATATGTACATTCAGCAAATGTCTTACACCGTGATCTAAAGCCTAGCAACTTGCTACTGAATGCAAATTGTGACCTTAAGATCGGAGACTTTGGGCTTGCTAGAACTACATCTGAAACTGATTTTATGACTGAATATGTGGTTACTCGGTGGTATCGAGCTCCAGAATTGCTTCTTAATTGTTCAGAATATACTGCAGCTATTGATATATGGTCTGTTGGTTGCATCCTTGGTGAAATAATGACCAGACAACCCCTCTTTCCTGGAAAAGATTATGTTCATCAGCTGAGACTGATCACAGAGCTCATAGGTTCACCTGATGACGCCAGCCTTGGATTTCTACGGAGTGATAACGCTCGTAGATATGTAAGACAGCTTCCACAATATCCAAGGCAGCAATTCGCTGCTAGATTTCCGAACATGTCTCCCGGTGCTGTTGATTTGTTAGAAAGGATGCTTGTGTTTGATCCAAACAGGCGCATTACAGTTGATGAGGCATTGTCTCACCCGTACCTGGCACCGCTTCACGATATTAACGAGGAGCCTGTTTGCGCGAGACCTTTCAGTTTTGATTTCGAGCAACCATCATTCACTGAAGAAGACATCAAAGAACTCATCTGGAGAGAATCTGTGATGTTCAATCCTGATCCACCTATTTATTGA 1863 0.4037 MGHVKKYCFLWKKENKGKQEKKDDGGNNRVSSILDDLLTVDIVDYEYKVNLVSGYEFSWVIDSGASIHVTPKKEFFTSYTQGDVCLETNMEMKLLLKDVRHAPDVRLNLVSVKRLDNEGFVNTFGFGQWKLTKGNLVVAREKCTSNLYVMHAMITKGSVNAIESKKVCSLWHRRLGHISEKRLNFLVRNDALSGLKNAELEKCSHCMAGKQRRLSFKKHQPSRKSDFLELVHSDICGPLKQRRDMALESAPSLADHNNIRGIPTHGGRYVQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETRDEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENVIALKDIIRPPQKENFNDVYVVYELMDTDLHQIIRSNQPLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPQYPRQQFAARFPNMSPGAVDLLERMLVFDPNRRITVDEALSHPYLAPLHDINEEPVCARPFSFDFEQPSFTEEDIKELIWRESVMFNPDPPIY 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02920 620 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 262 619 - -
Aip04g02920 620 Pfam GAG-pre-integrase domain 146 211 IPR025724 -
Aip04g02920 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Aip04g02920 620 Gene3D Transferase(Phosphotransferase) domain 1 370 599 - -
Aip04g02920 620 Gene3D Phosphorylase Kinase; domain 1 269 609 - -
Aip04g02920 620 ProSiteProfiles Protein kinase domain profile. 286 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02920 620 SUPERFAMILY Protein kinase-like (PK-like) 289 579 IPR011009 -
Aip04g02920 620 ProSitePatterns MAP kinase signature. 321 424 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aip04g02920 620 ProSitePatterns Protein kinases ATP-binding region signature. 292 316 IPR017441 GO:0005524
Aip04g02920 620 Pfam Protein kinase domain 290 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g02920 620 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 262 619 - -
Aip04g02920 620 CDD STKc_TEY_MAPK 279 615 - -
Aip04g02920 620 SMART serkin_6 286 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02920 Aip-Chr4 121108826 121118692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02920 245 615 MAP Kinase Gene Family AT4G01370 87.097 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aip04g02920 Pkinase 1e-69 CL0016