Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02918 ATGTCAAACCCTATAAAGTTGGTGTTACCTTATGGTGTTGAGAGGAAAGTGAATTGGACCAAAAGAGGAGAAAATATTTGGTTGGAACAAAGTTGGGAAAAGGTTGTGGAGTTGTGTGGTTTGAGTTACGAGTGGTTGTTGACTTTTGACTACAATGGAATGTCTCGTTTTGAAGTCAAAGTATATGATACCAATACTTTAAGGGTAGCTTATTATAAGGAGTATGATGTTGAGAATAACAAAGATGTTGATGATGATGATGATGATGATGAGTTTGTTCAAGAACACTTCAAGAGAAAGAAGACCAACACAGGTAAAATATAA 324 0.3519 MSNPIKLVLPYGVERKVNWTKRGENIWLEQSWEKVVELCGLSYEWLLTFDYNGMSRFEVKVYDTNTLRVAYYKEYDVENNKDVDDDDDDDEFVQEHFKRKKTNTGKI 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02918 107 SUPERFAMILY DNA-binding pseudobarrel domain 3 67 IPR015300 -
Aip04g02918 107 PANTHER B3 DOMAIN-CONTAINING 1 103 - -
Aip04g02918 107 Gene3D - 1 66 IPR015300 -
Aip04g02918 107 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02918 Aip-Chr4 121091065 121091388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02918 1 88 B3 DNA Binding Superfamily AT1G49475 28.409 4.45e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02918 - K21842 adu:107493091 164.851