Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02907 atgaGGACGAAGCAATCATTGGTCACATTAGAGAAGAATAAGATACACGGGAAGGTTACTCTGGGGATGCATGATCTGCTTGAAGAAATGGGCAAACAAATTGTAATTCAGAAATCTCCGAATGATGCTTGTAAGCGTAGCAGGTTGTGGTGTTTGGAGGATGTTGAGTTTGTACTTACTCAAAAGAAGAAAACTAAAGCAACTCATGGCATCGTTCTACGTAAGTGGAATAGCAAGACTGAAGTGAATCTATCTTTCTCAAAAATGTGCCAGTTAAAGCTTCTCATTTTAGATGGCGTGAATGCTCCCATTCTCTGCGATATTCCTTGTACATTAAAGGTATTTCGCTGGAGTTATTGTCCACTGAAAACTCTTCCCCTTACAGATCATCAACGCTATGAACTTGTTGAAATTGATCTGCCTTGGAGCAAAATTGTACGGTTATGGGATGGAAAGAAGGTTTTAGAAAAGTTAGAGCACTTGGATCTGTCACGGTGCAAGCAGCTGAAGCAAACGCCAGATCTTATTGGGGCTCCCTATCTTAAAAAACTTAATCTTTGTGAATGCAAGGAGCTGGATTATATTCACCCGTCTCTCGCACACCACAAGAGGCTTGTTGAATTGGAGTTAAGGGAATGTGAAAGTCTTGAAACACTTGGAGATAAATTGGAGATGAGTTCACTCGAGATACTAAATCTAAGCTGGTGCAATAGTTTGAGAAGATTGCCAGATCTTTCTGGGGCTCCCAATCTTAAAAAACTTAATCTTCAGGGATGCGAGAAGCTGGATTATATTCACCCGTCTCTCGCACACCACAAGAGGCTTGTTGAATTGGATTTAAGTGGATGTAAGAGTCTCGAAACACTTGGAGATAAATTGGAGATGAGTTCACTCGAGAAACTAGATCTACGCTGGTGCAGTAGTTTGAGAAGACTGCCAGAATTTGGGGAATGCATGAAACAGTTATCGATTCTTGATCTGGAAGGTACAGGTATAGAAGAGCTACTCCCAACGCTTGGCAATTTGGCTGGCGTGTCTAAGTTGGACTTAACTGGATGCCACAAGTTTACTGGTCTTCCCTTATCACTTGGATGTTTCGTTGGCCTTAAAAGGTTGGTGTTAAGTAGATTCGTGGAGCTTAGTTGTCTTCCTCACAAAACTCATGGGTTAGAGTCCCTCAGAGTCAGAGCTGATTATGATGATTCTGACAGCTCATCTAGAGAAGAGTCGACCCTTTCCTATGATATTGCCCACTTAGCCTCGTTGACGCATTTGGATTTATCTCACAGCAGTTTTTTAAGAGTTCCAATAACTATCCATCAACTTACCAGACTTAAATGTCTGAACGTAAGCTGTTGCGATGAATTGGAGGTTTTACCAGAGCTTCCATCAAGTCTACGAGAATTAGACGCACAGGGTTGTGATTCACTGGATGCATCGAATGTTGATGATGTTATATCAAAGGCGTGTTGTGGCTTTGCAGAATCAACTAGCCAAGATCGTGAAGACTTCTTGCAAATGTTGATCCCTAGGAAGGAAATTCCAGCATGGTTTGAGCATCAGGAAGAAGATGACGGAGTATCAGTGTCATTCCCGCAGAATTGCCCTTCAATTGAAACCATCGCACTTGCTCTCTGTTTCCTAATTGAAAAAAGATGTATTGACGAAGAAAATCCATCGGTGATCTGCAACGGTAAAGAATTCATCAATGCGAGTTTATACGTGGAGTCTTCAGATCATTTGTTCATTGTGTGCATGAACGGTTACTATTTTAGTAAGCTGTTATGCCAACACAATCGCTTCCAATTGGTAATTTCAGGTTATCATCATCATCTTGATATAGGACGTAGATATGGAGCACGTTGGGTGACTAAGCAAGACGTTGAAGGTTTCAAGAAAACAAAATCAAAAACTGGGAAAAGGAAAGCTACTCTTCAACGTATTATGGACATCATCTCACATTCTTCACCTTCTACTTCTGGGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCGCTATTCGCCCTTTGGCATCTCGCAAAAACTTTGA 2136 0.3919 MRTKQSLVTLEKNKIHGKVTLGMHDLLEEMGKQIVIQKSPNDACKRSRLWCLEDVEFVLTQKKKTKATHGIVLRKWNSKTEVNLSFSKMCQLKLLILDGVNAPILCDIPCTLKVFRWSYCPLKTLPLTDHQRYELVEIDLPWSKIVRLWDGKKVLEKLEHLDLSRCKQLKQTPDLIGAPYLKKLNLCECKELDYIHPSLAHHKRLVELELRECESLETLGDKLEMSSLEILNLSWCNSLRRLPDLSGAPNLKKLNLQGCEKLDYIHPSLAHHKRLVELDLSGCKSLETLGDKLEMSSLEKLDLRWCSSLRRLPEFGECMKQLSILDLEGTGIEELLPTLGNLAGVSKLDLTGCHKFTGLPLSLGCFVGLKRLVLSRFVELSCLPHKTHGLESLRVRADYDDSDSSSREESTLSYDIAHLASLTHLDLSHSSFLRVPITIHQLTRLKCLNVSCCDELEVLPELPSSLRELDAQGCDSLDASNVDDVISKACCGFAESTSQDREDFLQMLIPRKEIPAWFEHQEEDDGVSVSFPQNCPSIETIALALCFLIEKRCIDEENPSVICNGKEFINASLYVESSDHLFIVCMNGYYFSKLLCQHNRFQLVISGYHHHLDIGRRYGARWVTKQDVEGFKKTKSKTGKRKATLQRIMDIISHSSPSTSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRYSPFGISQKL 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02907 711 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 240 IPR044974 GO:0006952
Aip04g02907 711 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 242 552 IPR044974 GO:0006952
Aip04g02907 711 SUPERFAMILY RNI-like 409 547 - -
Aip04g02907 711 Gene3D Ribonuclease Inhibitor 293 397 IPR032675 -
Aip04g02907 711 Gene3D Ribonuclease Inhibitor 71 223 IPR032675 -
Aip04g02907 711 Gene3D Ribonuclease Inhibitor 224 292 IPR032675 -
Aip04g02907 711 Gene3D Ribonuclease Inhibitor 402 490 IPR032675 -
Aip04g02907 711 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 240 - -
Aip04g02907 711 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 242 552 - -
Aip04g02907 711 Pfam C-JID domain 510 585 IPR045344 -
Aip04g02907 711 SUPERFAMILY L domain-like 23 394 - -
Aip04g02907 711 ProSiteProfiles Leucine-rich repeat profile. 227 249 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02907 Aip-Chr4 120788874 120792594 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02907 5 348 WRKY Transcription Factor Family AT4G12020 33.884 1.01e-38 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02907 - - adu:107485828 887.486