Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02901 atggagtgtaagaaccagctggggctacagatcgaggcagtgttctacggtgtgaagccttgtgatgtgagataccaaagaggaacctttgaagaagctttcaagaaacacgaagagagacatgacagtgagaaggtcaaaagatggagagatgcgctaacagaagttgctgctcattctggttggacctccaaaaatcaGGACGAAGCAGTACTTGTGGAAAATATTGCTCAGCATATATTTGAAAAATTGATTCCTAAGTTGCCATCTTCAATGAAGAATCTTGTGGGGATTAATTCAAGAGTGGAACAAGTGATTACTCTCATAggccttgaattgaatgatgttcgctttataggcatatggggaatgggcggcatggGATGGCCGAAAGATTATGTAACAGAGAAATTAAAAAGATGTGGTCATGATGCTGAAATCGGTATTGATATTTTGATTAATAGATCACTGGTCACATTAGAGCCGGAGACATTCCTGGAGAGTACTCTTCTGGGGATGCATGATCTGCTTGAAGAAATGGGCAAACAAATTGTAATTCAGGAATCTCCGAATGATGCTTGTAACCGTAGCAGATTGTGGTGTTTGGAGGATGTTGAATTTGTACTTACTCAAAATAAGAAAACTAAAGCAACTCATGGCATCGTTCTACATAAGGAGTATAGCGAGAATGAAGTGAATCAGAGAGATTTATCTTTCTCAAAAATGTGCCAGTTAAAACTTCTCATTTTAGATGGCGTGAAAGCTCCCATTCTCTGCGATATTCCTTGTACATTAAAGGTATTTCGCTGGAGAGATTGTCCACTGAAAACTCTGCCCCTTACAGATCATCAACGCTATGAGCTTGTTGAAATTAATCTGTCTGAAAGCCAAATTGTAGAGTTATGGGATGGAAAGAAGGTTCTAGAAAAGTTAGAGCACTTGGATCTGTCATGGTGCAAGCAGCTGAAGCAAATGCCAGATCTTTCTGGGGCTCCCAATCTTAAAACACTTAATCTTTCGGGATGCGAGGAGCTGGATTATATTCACCCGTCTCTTGCACACCACAAGAGGCTTGTTGAATTGGATTTAAGCAGATGTAATAGACTTGAAACACTTGGAGATAAATTGGAGATGAGTTCACTCGAGAAACTATATCTATGTGGGTGCAGTAGTTTGAGAAGACTGCCAGAACTTTCTGGGGCTCCCAATCTTAAAGAACTTGATCTTAAGGAATGTACGGCCCTAAATTATATTCACCCGTCTCTCGCACACCACAAGAGGCTTGTTGAATTGAATTTAAGTGGATGTAGGAGTCTTAAAACACTTGGAGATAAATTGGAGATGAGTTCACTCGAGAAACTATATCTAAGCTGGTGCAGTAGTTTGAGAAGACTGCCAGAATTTGGGGAATGCATGAAACAGTTATCGATTCTTGATCTGAAAGGTACAGGTATAGAAGAGCTACCCCCAACGCTTGGAAATTTGGCTGGCGTGTCTGAGTTGTACTTAACTTGGTGCGGCAAGATTACTGGTCTTCTCTTATCACTTGGATGTTTCGTTGGCCTAAAAAGCTTGGTATTAAGTAGTTCCGTCGAGCTTAGTTGTCTTCCACAGAACACTGATGGGTTAGAGTCCCTCACAGTCAGAGCTGATTATGATGATTCTGACAGCTCATCTAGAGAAGAGTCGAACCTTTCCTATGATATTGCCCACTTAGCCTCGTTGACGGATTTGAATTTATCTATGAGCAGGTATTTAAGAGTTCCAATAACTATCCATCAACTTCCCAGACTTACACGTCTGAATCTATCTGATTGCATACAATTGGAGGTTTTACCAGAGCTTCCATCAAGTCTACGAGAATTACAGGCACGGGGTTGTGATTCACTAGATGCATCAAATATTCATGATGTCATATCAAAAGCGTGTTGTGTCTTTGCAGAATCAGCTAGCCAAGATCGTGAAGACCTCTTTCAAATGTTGTTCAATGGGGTGGAAATGCCAGCATGGTTTGAGGATCAGGAAGAAGATAACGGATTATCACTCTCATTCCCGCATAATTCCCCTTCAACTGAAACTGTCGCGCTTGCTCTCTGTTTCCTATTATATGGTGACAAATACTCTAAAGAACAGCCATCGGTGATCTGCAACGGTAAAGAATTTATCAACACGAGATTATTGAAGGTGTCAATGTCATCATATTATAAGACTTTGCTCATTCTCTGCCTGAATGGTTACAGTTTTAGTAACCTGTTATGCCAAGACAATCGCTTCCAACTGCAATTTCCTCCCAGTGGTTATTGTAACACCCGAGCAAAGAGATCTGGAGCACGTTGGGTGACTAAGCAAGACATTCAAGAATTCAAGAAAAGAAAATCCCAAACAGGGAAAAGAAAAGCAACTCTTGAACTGAACATGGACATCATTTCACATCCTTCATCTTCTAGGAATAAGATGCTTGTGGTTGACCCTCCAATGTATGAAGAAGAGGAAGAGCATGATTGCCAAGCTTAG 2514 0.364 MECKNQLGLQIEAVFYGVKPCDVRYQRGTFEEAFKKHEERHDSEKVKRWRDALTEVAAHSGWTSKNQDEAVLVENIAQHIFEKLIPKLPSSMKNLVGINSRVEQVITLIGLELNDVRFIGIWGMGGMGWPKDYVTEKLKRCGHDAEIGIDILINRSLVTLEPETFLESTLLGMHDLLEEMGKQIVIQESPNDACNRSRLWCLEDVEFVLTQNKKTKATHGIVLHKEYSENEVNQRDLSFSKMCQLKLLILDGVKAPILCDIPCTLKVFRWRDCPLKTLPLTDHQRYELVEINLSESQIVELWDGKKVLEKLEHLDLSWCKQLKQMPDLSGAPNLKTLNLSGCEELDYIHPSLAHHKRLVELDLSRCNRLETLGDKLEMSSLEKLYLCGCSSLRRLPELSGAPNLKELDLKECTALNYIHPSLAHHKRLVELNLSGCRSLKTLGDKLEMSSLEKLYLSWCSSLRRLPEFGECMKQLSILDLKGTGIEELPPTLGNLAGVSELYLTWCGKITGLLLSLGCFVGLKSLVLSSSVELSCLPQNTDGLESLTVRADYDDSDSSSREESNLSYDIAHLASLTDLNLSMSRYLRVPITIHQLPRLTRLNLSDCIQLEVLPELPSSLRELQARGCDSLDASNIHDVISKACCVFAESASQDREDLFQMLFNGVEMPAWFEDQEEDNGLSLSFPHNSPSTETVALALCFLLYGDKYSKEQPSVICNGKEFINTRLLKVSMSSYYKTLLILCLNGYSFSNLLCQDNRFQLQFPPSGYCNTRAKRSGARWVTKQDIQEFKKRKSQTGKRKATLELNMDIISHPSSSRNKMLVVDPPMYEEEEEHDCQA 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02901 837 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 128 IPR044974 GO:0006952
Aip04g02901 837 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 131 393 - -
Aip04g02901 837 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 128 - -
Aip04g02901 837 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 131 393 IPR044974 GO:0006952
Aip04g02901 837 Gene3D - 1 88 IPR035897 -
Aip04g02901 837 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 395 718 - -
Aip04g02901 837 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 395 718 IPR044974 GO:0006952
Aip04g02901 837 SUPERFAMILY L domain-like 173 547 - -
Aip04g02901 837 SUPERFAMILY L domain-like 564 627 - -
Aip04g02901 837 Pfam TIR domain 1 97 IPR000157 GO:0007165
Aip04g02901 837 Gene3D Ribonuclease Inhibitor 447 550 IPR032675 -
Aip04g02901 837 Gene3D Ribonuclease Inhibitor 554 644 IPR032675 -
Aip04g02901 837 Gene3D Ribonuclease Inhibitor 226 377 IPR032675 -
Aip04g02901 837 Gene3D Ribonuclease Inhibitor 378 446 IPR032675 -
Aip04g02901 837 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 62 IPR035897 -
Aip04g02901 837 ProSiteProfiles TIR domain profile. 1 84 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02901 Aip-Chr4 120678023 120685378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02901 131 501 WRKY Transcription Factor Family AT4G12020 35.990 8.16e-47 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02901 - - adu:107485828 903.279