Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02897 ATGAAGAATCTAGTAGGGATTGATTCAAGGTTGGAACAAGTTGTTAGACACAttggtcttggggggaatgatgttcgcttcattggcatatgtggaatgggtggcataggtaagacaactatttctaGAAGAGTCTATGAAACCATTAGAAGTGAATTTAAAGCTAGTTGCTTTCTTGCCAATGTAAGAGAGACATGTGAGAAAAGAGGTATTGTTCAAATCCAGAAACAACTTCTTGATCGTACGAACATAAATTCTGATACTAGTTTCCACGATGAGTTTGAGGGAAAAGCTATAATTTGTGACTCTTTGTGCCACAAGAAGGTCCTTCTAGTTCTCGATGATGTAGACGATGGAGGCTTATTGGAGAATTTGGCTGGTGAAAAAGATTGGTTTGGTCCTGGAAGCAGAATAATAATCACAACTAGAGATAAACATGTACTAGAAGTGCACGGAGCAGTCAATAGAATTTGTAAGGTTGAAGGGTTAGAGCAAAATGAAGCACTTGAACTCTTTTGTTTGAAAGCTTTTAAAAGGCCAAAACCTGAAAAAGGGTATATGGATTTGTCCAAAGAAGTGGTTGAGTATTGTGATGGTCTTCCGTTGGCACTCGTAGTATTGGGTTCCCATCTTTGTGGACAAACCATTGATGTTTGGCGCAGTGCTATTGAGAAAATAAAGAGCTTTCCTCATGACAAAATTTTTAATACATTGAAAATAAGTTATGATGGTTTAGATCATTCGGAAAAGAATATCTTTTTAGATATCGCTTGCTTTTTCAAAGGACGTGAGAAAGATTATGTAACAAATATATTGAGAAGGTGTGGTTATCATGCTGAAGCTAGCATTTCTGCTTTAATAAATAAATCTTTGCTCAGTATAATAAATGATGATAAGTATGCCGATATGTTGGGGATGCATGATCTGCTTGAAGATATGGGCAAACATATTGTAATTCAAGAGTCTCGTGATGATCCTAGCAGGCGAAGTAGATTGTGGTCTTACACGGATGTTGATCTTGTACTTGCACAAAACAAGGAAAATGAAGCAACTCATAGCATCGTTCTATATAATATGTACTCGGAGATTGAAAGAAATTGGGGAGATTTGGATATAAGAGATTTATCTTTCTCAAATATATTCAAGCTAAAGCTTCTCATTTTAGATGGTGTGAAAGTTCCCATTCTCTGCGATATTCCTTGTACATTAAAGGTTTTGCACTGGAAAGGTTGTCCAATGGAAACTCTGCCCTTTACAGATCGAAGATATGAACTTGTTGAAATTGATTTGTCTTATAGCAAAATTGTACAGTTATGGGATGGAAAGAAGGTTCTAAGACTGTTACAGCACTTGAATCTATCCTTCTGTGACAAGCTGAAGCAAACGCCAGATCTTTCTGGGGCGCCCAATCTTAAAACACTTAATCTTCATAGATGTGAGGAGCTGAATTATATTCATCCATCTCTCGCACACCACAAAAGCCTTGTTGAATTGAATTTAATGAACTGTAAGAGTCTTGAAACACTTGCTGATAAATTGGAGATGAGTTCACTCGAAAAACTATATCTGTTCTCCTGCAGTAGTTTGAGAAGACTGCCAGAATTTGGGAAATGCATGAAACAGTTATCGATTCTTAATCTGACACTTACAGGTATAGAAGAGTTACCGACGACGCCTGGAAGGTTGGGTGGCGTATCTGAGTTGGACTTGAGTGGATGCAGAAAGCTTACTAGTCTTCCCTTATCACTTGCATGTTTCGTTGGCCTAAAGAAGTTAGAGTTAAGTAGATTTGTGGAGCTTAGTTGTGTTCCATACAGCACTCATGGGTTAGAGTCCCTCACAGCTTATGATAAGTCTGACAACCCAAATATAGTTGGACTTTTGTGTTCTCTCTCTCGCCTCACCTCTTTGAGTACCCTGAAATTACGCCGATGTTTTCCCACTTCTAGAAAAGAGTCGACCATTTGCTACAATCTTGGCCACTTAACGTCGTTGACGGATTTGGATTTATCGCGCAACTATTTTTTAAGAGTTCCAATAAGTATCCATGAACTTCCCAGGCTTACACGTCTGAATCTAAATGATTGTCGTTTTCTGAAGGTTTTACCAGAGCTTCCATCAAGTTTACGAGAATTACAGGCACAGCGTTGTCATTCACTGGATGCATCCAACGTGAATGATGCGATATCAAAGGCGTGTTGTGGCTTTGCAGAATCAGCTAGCCAAGATCGTGAAGATGTCTTGCAAATGTTGATCCCTGGGAAGGAAATTCCAGCTTGGTTTGAGCATCAGGAACAAGATGATGGAGTATCAGTGTCATTCCCGCATAATTGCCCTTCAACTGAAATCATGACGCTTGCTCTCTGTTTCCTATTAGATGGCTTCACGTTCTTACAAGGACAGCCATCGGTGGTCTGCAACGGTAAAGAATTCATCAACACGAGTTTATTGAAGATGTCGCCGGGGACATCTTCTAAGCAATTGTTCATTGTCTGCCTGAACGGTTTCTGTTTTAGTGACCAGTTATGCCAAGACAATCGCTTCCAAATGCTAGTTCCCAGTTGTGGTTACTTTAATAATATCCGAGTGCTTAGCTCTGGAGCATGTTGGGTGATTAAGCAAGACATTGAAAGTTTCAAGAAAAGAAAATCCCAAACAGGGAAAAGGAAAGCAACTCTTGAACTGGATATTGACATGATCTCACATTCTTCACCTTCCAGGAAGAAGATGTTGGTGGTTGCCCCTCCACTGTATGAAGAAGAGGAATAG 2769 0.3828 MKNLVGIDSRLEQVVRHIGLGGNDVRFIGICGMGGIGKTTISRRVYETIRSEFKASCFLANVRETCEKRGIVQIQKQLLDRTNINSDTSFHDEFEGKAIICDSLCHKKVLLVLDDVDDGGLLENLAGEKDWFGPGSRIIITTRDKHVLEVHGAVNRICKVEGLEQNEALELFCLKAFKRPKPEKGYMDLSKEVVEYCDGLPLALVVLGSHLCGQTIDVWRSAIEKIKSFPHDKIFNTLKISYDGLDHSEKNIFLDIACFFKGREKDYVTNILRRCGYHAEASISALINKSLLSIINDDKYADMLGMHDLLEDMGKHIVIQESRDDPSRRSRLWSYTDVDLVLAQNKENEATHSIVLYNMYSEIERNWGDLDIRDLSFSNIFKLKLLILDGVKVPILCDIPCTLKVLHWKGCPMETLPFTDRRYELVEIDLSYSKIVQLWDGKKVLRLLQHLNLSFCDKLKQTPDLSGAPNLKTLNLHRCEELNYIHPSLAHHKSLVELNLMNCKSLETLADKLEMSSLEKLYLFSCSSLRRLPEFGKCMKQLSILNLTLTGIEELPTTPGRLGGVSELDLSGCRKLTSLPLSLACFVGLKKLELSRFVELSCVPYSTHGLESLTAYDKSDNPNIVGLLCSLSRLTSLSTLKLRRCFPTSRKESTICYNLGHLTSLTDLDLSRNYFLRVPISIHELPRLTRLNLNDCRFLKVLPELPSSLRELQAQRCHSLDASNVNDAISKACCGFAESASQDREDVLQMLIPGKEIPAWFEHQEQDDGVSVSFPHNCPSTEIMTLALCFLLDGFTFLQGQPSVVCNGKEFINTSLLKMSPGTSSKQLFIVCLNGFCFSDQLCQDNRFQMLVPSCGYFNNIRVLSSGACWVIKQDIESFKKRKSQTGKRKATLELDIDMISHSSPSRKKMLVVAPPLYEEEE 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02897 922 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 552 IPR044974 GO:0006952
Aip04g02897 922 SUPERFAMILY L domain-like 306 714 - -
Aip04g02897 922 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 3 552 - -
Aip04g02897 922 Pfam NB-ARC domain 12 232 IPR002182 GO:0043531
Aip04g02897 922 PRINTS Disease resistance protein signature 27 42 - -
Aip04g02897 922 PRINTS Disease resistance protein signature 197 211 - -
Aip04g02897 922 PRINTS Disease resistance protein signature 103 117 - -
Aip04g02897 922 PRINTS Disease resistance protein signature 560 576 - -
Aip04g02897 922 Pfam C-JID domain 752 803 IPR045344 -
Aip04g02897 922 Gene3D - 1 160 IPR027417 -
Aip04g02897 922 Gene3D Ribonuclease Inhibitor 654 733 IPR032675 -
Aip04g02897 922 Gene3D Ribonuclease Inhibitor 353 514 IPR032675 -
Aip04g02897 922 Gene3D Ribonuclease Inhibitor 515 653 IPR032675 -
Aip04g02897 922 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 516 791 - -
Aip04g02897 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 256 IPR027417 -
Aip04g02897 922 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 516 791 IPR044974 GO:0006952
Aip04g02897 922 Gene3D - 162 246 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02897 Aip-Chr4 120627970 120631995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02897 5 619 WRKY Transcription Factor Family AT5G45050 32.273 3.88e-80 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02897 - - ahf:112797503 1197.96