Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02896 atgggcaaatatattgtaattcaagaatgtcgcgacgatcctagcaagcaaagcagattgtggtcttacaaggatgttgatcttgtacttgcacaaaacaagGAAATTGAAGCAACTCATAGCCTTGTTCTATATAATAAGATGGAGTGGGGGTTTAAAGGGAAGCAGAGAGTTTTGGATATAAGAGATTTATCATTCTCAAATATGTGCAAGCTAAAGATTCTCATTTTAGATAACGTGAAAGGTCCCATTCTCTGCAATATTCCTTGTACATTAAAGGTTTTGCACTGGAGACGTTGTCCAATGAAAACTCTGCCCTTTACAGATCAAAGCTATGAACTTGTTGACATTGATCTTTCTTATAGCAAAATTGTACAGTTATGGGATGGAAAGAAGGTTCTAAAAAAGTTAGAGCACTTGAATCTGTCCAACTGCCACAAGCTGAAGCAAACGCCAGAGCTTTGTGGGGCTCTCAATCTTAAAACACTTGATCTTAGTGAATGTAAGGCGCTGAATTATATTCACCCGTTTCTGGCACACCACAAAAGCCTTGTTGAATTGAATTTATATGGCTGCAGTAGATTGAGAAGACTGCCAGAATTTGGGGAAGGCATGAAACAATTATCGGTTCTTATTCTGACAGATACAGGTATAGAAGAACTACCCACGACACCTGGAAAATTTGCTGGTGTGTCTAAGTTGGACTTAAGTGGATGTGACAAGCTTACTAGTCTTCCCTTGTCACTTGGATGTTTCGTTGGCCTAAAGGAGTTGGTGTTGAGTAGATTCATGGAGCTTAGTTGTGTTCCATACAGCACTCATGGGTTAGAGTCCCTCACAGTTGAGGATTATTCTGACAGCCCAAATATTGTTGGACTTTTGTGTTCTCTCTCTTGCTTCACCTCTTTGAGTACCCTGAAATTACACGTATGCTTTGGCACCCTTTCTTACAATCTCGGCCATTTAGCGTCGTTGACGGATTTGGATTTATCGGACAATGATTTTCGCCAACTTCCAATAAGTATTCTTGAACTTCCCAGACTTACACGTCTGCAGCTATATCATTGCCGTTTTCTGGAGGTTTTGCCAGAGATTCCATCAAGTCTAAGAGTATTACAAGCAGACCGTTGTTGTTCACTGGTTGCATCCAAGGTATATGATGCTATATCAAAAGCGTGTTGTGTCTTTGCAGAATCAGCTAGCCAAGATCGTGAAGACTTCTTGCAAATGTTGATGCCTGAGTTATATCAGGAAATGCCAGCATGGTTTGAGGATCAGGAAGAAGATAACGGAGTATCACTCTCATCCCCTTCAACTGAAATCATCGCACTTGCTCTCTGTTTCCTATTAGATGGTGACAAATACTCTGAAGAACAGCCATCGGTCATCTGCAACGGTAAAGAATTCATCAACACGAGATTATTGAAGGTGTCAATGTCATCATATTATAAGACTTTGCTCATTCTCTGCCTGAATGGTTACAGTTTTAGTAACCTGTTATGCCAAGATAATCGCTTCCAACTGCAGTTTCCCAGTGATTGTTGTGAAATCCGAGTAAAAAGATCTGGAGCACGTTGGGTGTGCAAGCAAGACGTTCAACTTTTGAAGAAAAGAAAATATGAAACAGGGAAAAGAAAAGCAACTCTTAAACTGAACATGGACATGATATCACATTCTTCAGCTTCTAGAAATAAGATGCCCGTGGTTGACTCTCCAGTGTATGAAGAAGAGTGCTCAAAAATCAGCAGAGTGAGATTTAGCAAGAATAACGAGACAGATTCAGATTCATTACAGAAGGAAGGAGAAAATCTGCAGGCCATAGCGAGTACGAATGTCAACTTAGTTGCAATTCTTCTTCAAATCACAGAGCCGGTTGGATACTTAACTTTCTCCTTACTCACATGTGCTTTGTTAAGCTTATAG 1923 0.3812 MGKYIVIQECRDDPSKQSRLWSYKDVDLVLAQNKEIEATHSLVLYNKMEWGFKGKQRVLDIRDLSFSNMCKLKILILDNVKGPILCNIPCTLKVLHWRRCPMKTLPFTDQSYELVDIDLSYSKIVQLWDGKKVLKKLEHLNLSNCHKLKQTPELCGALNLKTLDLSECKALNYIHPFLAHHKSLVELNLYGCSRLRRLPEFGEGMKQLSVLILTDTGIEELPTTPGKFAGVSKLDLSGCDKLTSLPLSLGCFVGLKELVLSRFMELSCVPYSTHGLESLTVEDYSDSPNIVGLLCSLSCFTSLSTLKLHVCFGTLSYNLGHLASLTDLDLSDNDFRQLPISILELPRLTRLQLYHCRFLEVLPEIPSSLRVLQADRCCSLVASKVYDAISKACCVFAESASQDREDFLQMLMPELYQEMPAWFEDQEEDNGVSLSSPSTEIIALALCFLLDGDKYSEEQPSVICNGKEFINTRLLKVSMSSYYKTLLILCLNGYSFSNLLCQDNRFQLQFPSDCCEIRVKRSGARWVCKQDVQLLKKRKYETGKRKATLKLNMDMISHSSASRNKMPVVDSPVYEEECSKISRVRFSKNNETDSDSLQKEGENLQAIASTNVNLVAILLQITEPVGYLTFSLLTCALLSL 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02896 640 PANTHER DISEASE RESISTANCE PROTEIN (NBS-LRR CLASS) FAMILY PROTEIN 270 373 - -
Aip04g02896 640 Gene3D Ribonuclease Inhibitor 202 391 IPR032675 -
Aip04g02896 640 Gene3D Ribonuclease Inhibitor 56 201 IPR032675 -
Aip04g02896 640 SUPERFAMILY L domain-like 61 380 - -
Aip04g02896 640 PANTHER LEUCINE-RICH REPEAT-CONTAINING 182 311 - -
Aip04g02896 640 PANTHER LEUCINE-RICH REPEAT-CONTAINING 270 373 - -
Aip04g02896 640 PANTHER LEUCINE-RICH REPEAT-CONTAINING 65 262 - -
Aip04g02896 640 PANTHER DISEASE RESISTANCE PROTEIN (NBS-LRR CLASS) FAMILY PROTEIN 182 311 - -
Aip04g02896 640 PANTHER DISEASE RESISTANCE PROTEIN (NBS-LRR CLASS) FAMILY PROTEIN 65 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02896 Aip-Chr4 120622913 120626930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02896 2 357 WRKY Transcription Factor Family AT4G12020 29.067 5.70e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02896 - - adu:107485881 661.373