Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02894 atgggcaaacttattgtaaatcaagaatctccagatgatgctagtaagcgaagcaggttgtggtgtgaagacgatatcgatcttgtacttagacaaaacaagGAAACTAAAGCAACACGTAGCATTGTTCTATACGACAAGCGGGATGAACTGTATTGGAATGATTTAGCTTTCTCAAACATATGTCAGCTAAAGCTCCTCATTTTAGACGGCGTGAAATCTCCCATTCTCTGCAATATTCCCTGTACATTAAGAGTTTTGCACTGGAACGGTTGTCCAATGGAAACTCTACCCTTTACAGATGAACACTATGAACTTGTTGAAATTGATCTGTACCTCAGCAAAATTGTACACGTGTGGCATGGAAAAAAGTTTCTAGAAAAGTTGAAGTACTTAAATCTGTCAAACAGCCACAACCTGAAGCAAACGCCTGATCTTTCCGGGGCTCCCAATCTTGAAACACTTGATCTTTCATGCTGTTCAGAGCTGAATGACATTCACCAATCTCTCATACACCACAAAAACCTTCTTGAATTGAATTTAATCAAGTGTGGAAGTCTTCAAACACTTGGAGATAAATTGGAGATGAGTTCACTCAAGGAACTAGATCTATACGAGTGCAATAGTTTGAGAAAACTGCCAAAATTTGGGGAATGCATGAAACGGTTATCCATTCTTACTTTGAGTTGTACAGGCATAACAGAGCTACCCACAACGGTTGGGAATTTGGTTGGCCTATCTGAGTTGGACTTACAAGGATGCAAAAGGCTTACTTGCCTTCCAGACACCATATCTGGATTAAAGTCCCTCACGGCTTTGGATGTTTCTGACTGCCCAAATCTTCTCCTTCAATCTTTGGATTCTCTTTCTACTCTAACCTCATTGCTTTTATCGTGGAACAAATGTGTGGAGGCATCGCGTTGTAAATCACTGGATGCATCCGATGTCAATGATGTTATATCAAAGGCGTGCTGTGCCTTCGCCGCATCAGCTAGCCAAGATGGTGATGACGTCATGCAAATGTTGGTTGCAGGGGAGGAAATACCATCATGGTTTGTCCATAGGGAAGAAGGTAACGGAATAACAGCCACATTTCCACATACTGAAACCATTGCACTTGCTATCTGTTTCCGATTGAGATCAACATCAAGGCGCATCAGAGGAGAGCCTTCGGTTATCTGCAATGGCGAAGAATTCATCACCGAGACTTTACTTGCAATGCCGCTGATTGGATATTCTCCGCATTTTTTCCTTCTATGCTTGAGAAGTGACTATTTTGTTGACCAATCTTGCCAAGATTATCTCTTCCAAATGTTATTTCCTAACGATTATTATGGAGATATCACAGTAGAGAGTTCAGGAGCCCGCTGGGTATGTACGCAAGACATTCAAGATTTGATGAAAGCTGGAACTGAAACAGCAACATGA 1428 0.3866 MGKLIVNQESPDDASKRSRLWCEDDIDLVLRQNKETKATRSIVLYDKRDELYWNDLAFSNICQLKLLILDGVKSPILCNIPCTLRVLHWNGCPMETLPFTDEHYELVEIDLYLSKIVHVWHGKKFLEKLKYLNLSNSHNLKQTPDLSGAPNLETLDLSCCSELNDIHQSLIHHKNLLELNLIKCGSLQTLGDKLEMSSLKELDLYECNSLRKLPKFGECMKRLSILTLSCTGITELPTTVGNLVGLSELDLQGCKRLTCLPDTISGLKSLTALDVSDCPNLLLQSLDSLSTLTSLLLSWNKCVEASRCKSLDASDVNDVISKACCAFAASASQDGDDVMQMLVAGEEIPSWFVHREEGNGITATFPHTETIALAICFRLRSTSRRIRGEPSVICNGEEFITETLLAMPLIGYSPHFFLLCLRSDYFVDQSCQDYLFQMLFPNDYYGDITVESSGARWVCTQDIQDLMKAGTETAT 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02894 475 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 49 303 IPR044974 GO:0006952
Aip04g02894 475 SUPERFAMILY L domain-like 52 304 - -
Aip04g02894 475 Gene3D Ribonuclease Inhibitor 34 323 IPR032675 -
Aip04g02894 475 PANTHER DISEASE RESISTANCE PROTEIN TAO1-LIKE 49 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02894 Aip-Chr4 120586988 120588730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02894 2 281 WRKY Transcription Factor Family AT4G12020 36.364 2.26e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02894 - - adu:107485873 880.167