Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02893 ATGTGCAAGCTAAAGCTTCTCGTTTTAGATTTCGTGGAAGCTCCCATTCTCTGCGATATTCCTAGTACATTAAAGGTTTTGCACTGGAAATGTTGTCCAATGGAAACTCTGCCCTTTACAGATCAACACTATGAACTTGTTGAAATCCATCTGCCTGATAGCAAAATTGTACAGTTATGGGATGGAAAGAAGGTTCTTAAAAAGTTAGAGCTCTTGAATTTGTCTTGCTGCTACAAGCTGAAGGAAACGCCAGATCTTTCTGGAGCTCCCGTTCTTAAAATACTTAATCTTGAGCATTGTAGGGAGCTGAATTATGTTCACCCGTCGCTCGCACTCCACAAAAGCCTTGTTGAATTGAATTTAACGGGATGTTATAGTATTGAAACACTTGCAGATAAATTGGAGATGTGTTCACTCGAGACACTAGGTCTAGACTGTTGCACTCGTTTGAGAAGACTGCCAGAATTTGGGGAATGCATGAAACAGTTATCGATTCTTATTCTGACATATACAGATATAGAAGAGGTACCCACGACGCTTGGAAATTTGGCTGGCGTGTCTGAGTTGGACTTAACTGGATGTGACAAGCTTACTAGTCTACCCTTAACTGGATGTTTCCTAAAGAAGTTGGAGCTACATGGATTCGTCGAGCTTAGTTGTCTTCCACACGAAGCTCCTAGCCTGAAATTAGAAGGATGTTTTAGCACATCTAAAGAGTCGACCCTTTACTGCGATCTTGGCCACTTAGCGCAGTTGACGAATTTGGATTTATCGGATAACTGTTTTATAAGAGTTCCAATAAGTATCCATCAACTTCCCAGACTTACATGTCTAAAGCTATCTTTTTGCGATGAATTGGAGGTTTTACCAGAGCTTCCATCAAGTCTACGAGAATTACACGCACAGGGTTGTGATTCACTAGATGCATCAAATGTTGATGATGTTATATCAAAGGCGTGTTGTGGCTTTGCAGAATCAGCTAGCCAAGATCGTGAAGATGTCTTGCAAATGTTGATCACGGGGGAGGAAATTCCAGGATGGTTTGAGCATCAGGAAGAAGATGAGGGAGTATCAGTCTCATTCCCACTTAATTGCCCTTCAACTGAAATGGTCGCACTTGCTCTCTGTTTCCTATTTGAACGTACCAAAGGTTACAGAACATTCACATTCTATCCTTCTGTGATCTGCAACGGGAAAGAATTCATCAACGCGAGTTTATACGTGGTGGATAGTTCAGATTCTTTGCTCATTGTAGATGTGGAGCACGTTGGGTGTGCAAGCAAGACATTCAAGATTTCAGGAAAACAAAATCCCAAACAGGGAAAAGAAAAAGAAACTCTTGAATGGAACATGGACATGAGGTCACATTCTTCAACTTCTAGGAATAAGATGTTGGTGGTTGGCCCTCCACTGTGTGACGAAGAGGAAAAGCATGGTGCCACAGCAGAGGGTGCTATTGGCGGTTTGGCATCTCGCAAAAGCTCTGACCCACCTGAACTCTTACTTCTCTTCCCTTTGCATTCCCCACAGCACTTGAGGCAGTTGGATACTTACTTTCTCCTTGCTCACATGGGCTCTGTCAAGCTTAAAGAATGGATGTTTGTCCTGCTTACTCTGTTAAGAAGTTCTAAGGTTCACTTTGTTGGCAAGTGCATTCTTCTGATGAGATTTTACAGGTGCTTTTTGACTGGTTCAGACATGATGTTCGGCTGTGAAAAGCATGCAGCACCACGCTGCAGGCATGAGGCAACACTTGTGGAAAGCATTGCTCAACATGTGCATACAAGGCTAATTCCAAAATTGCCATCTTGCATAGAGAACCTTTTTGTAAAGCAGGACATTGATGTGTTTAAGAAAAAGTTTGATGTGTTGGAAATGCATGATTTGCTTCAAGAAATGGGGAGAAACTTTGTCATTCAAGAATCTCCAAATTATCCTAGTAAACGTAGTCGATTGTGGTCTCCAGAGGACCTTGATCTCATGCTTACACAAAACAAGGGAACTGAAACAATTCAAAGCATAGTTCTACCTCCAATAGGAAATGGGACATACTATGTGGAAAGTTGGAGAGACAAAGCTTTTCCAAATATGAGTCAGCTAAAATTTCTCAACTTTGATTTTGTGAGAGCTCATATTCATATCAATATTCCAAGTACCTTAAAAGTTCTTCACTGGGAACTTTGTCCACTGGAGACCTTGCCCCTTGTGGATCAAAGATATGAACTTGTTGAAATTAAAATAAGTTGGAGTAACATTGTACAACTTTGGCATGGATTTAAGTTTCTAGAGAAGTTGAAGCACTTGGATCTAAGCTGTTCAGGCTTGGAGCAAACACCAGATCTTTCAGGGGTTCCTGTTCTTGAAACACTTGATCTTTCATGTTGTCACTGCCTAACTCTTATTCACCCCTCTCTCATATGCCACAAAAGCCTTCTTGTGTTGAATTTGTGGGAGTGCACAAGTCTTGAAACTTTTCCAGGTAAATTAGAGATGAGTTCGCTCAAGGAACTGAATCTTTGTGACTGTAAGAGTTTCATGAGTCCTCCTGAATTTGGAGAGTGCATGACAAAGTTATCAAGACTTTCTTTTCAGGACATGGCTATATCTGAACTACCCATATCACTTGGATGTTTAGTTGGCCTATCTGAATTGGACTTAAGAGGTTGCAAAAAGCTTACTTGCCTTCCTGACAGTATTCATGAATTAGAGTCCCTCAGAATTCTGCGTGCTTCTTCGTGCTCAAGTCTTTGTGATTTGCCACATTCTGTGTCGGTTATACCTTTTTTAAGCATCCTTGACTTACGAGATTGTTGTCTAACTGAGGAGTCGTTCCCTTGTGATTTCGGACAGTTTCCATCGCTGACGGATTTGGATTTATCAGGCAACCATTTTGTTAATTTGCCAATAAGTATCCATGAACTTCCCAAGCTTAAATGTCTTAGCCTAAATGGTTGCAAAAGGCTTCAAAGTTTGCCCGAGCTTCCTTCAAGTATAAGAGAACTAAAGGCATGGTGTTGTGATTCACTGGACACACGCAGTTTCAATAATTTATCAAAGGCATGTTCTGTTTTTGCATCAACTAGCCAAGGCCCTGGTGAGGTCTTGCAAATGGTGATTCCAGGGACGAATATTCCTTCATGGTTTGTTCATCGACAAGAAAGTAACTGCTTACTAGTCCCCTTCCCACATCATTGCCATCCAAGTGAAAGGCTAGGAATTGCTTTATGTTTCCTAGTGCGGCCTTCCGAACGTTGGTTTTCCCTCTCACTCCGTTTGGCCGTTGGCAATGGTGATAGAGTCATAACCAACAGCATTCCTATTTGGTATCATCAAGGTTATCACCTGTGTATGTTTTGTATGACCAATGATTGTTTAATTGATCAAGAAACTCGGAAAGCCATTCATTTTGAGCTGTCATTTGAAGATATCAATGTTGAATATCCGCCAGAGATATTGAGCTCTGCTGCATGTTGGGTGCATACTGATGAAATTGAGCATTTGAACAAAGGCGAAACTGAGAGGCCCAACAAGAAAAGACAAAAGATGCTAGAAGAGAAACATTGA 3564 0.4127 MCKLKLLVLDFVEAPILCDIPSTLKVLHWKCCPMETLPFTDQHYELVEIHLPDSKIVQLWDGKKVLKKLELLNLSCCYKLKETPDLSGAPVLKILNLEHCRELNYVHPSLALHKSLVELNLTGCYSIETLADKLEMCSLETLGLDCCTRLRRLPEFGECMKQLSILILTYTDIEEVPTTLGNLAGVSELDLTGCDKLTSLPLTGCFLKKLELHGFVELSCLPHEAPSLKLEGCFSTSKESTLYCDLGHLAQLTNLDLSDNCFIRVPISIHQLPRLTCLKLSFCDELEVLPELPSSLRELHAQGCDSLDASNVDDVISKACCGFAESASQDREDVLQMLITGEEIPGWFEHQEEDEGVSVSFPLNCPSTEMVALALCFLFERTKGYRTFTFYPSVICNGKEFINASLYVVDSSDSLLIVDVEHVGCASKTFKISGKQNPKQGKEKETLEWNMDMRSHSSTSRNKMLVVGPPLCDEEEKHGATAEGAIGGLASRKSSDPPELLLLFPLHSPQHLRQLDTYFLLAHMGSVKLKEWMFVLLTLLRSSKVHFVGKCILLMRFYRCFLTGSDMMFGCEKHAAPRCRHEATLVESIAQHVHTRLIPKLPSCIENLFVKQDIDVFKKKFDVLEMHDLLQEMGRNFVIQESPNYPSKRSRLWSPEDLDLMLTQNKGTETIQSIVLPPIGNGTYYVESWRDKAFPNMSQLKFLNFDFVRAHIHINIPSTLKVLHWELCPLETLPLVDQRYELVEIKISWSNIVQLWHGFKFLEKLKHLDLSCSGLEQTPDLSGVPVLETLDLSCCHCLTLIHPSLICHKSLLVLNLWECTSLETFPGKLEMSSLKELNLCDCKSFMSPPEFGECMTKLSRLSFQDMAISELPISLGCLVGLSELDLRGCKKLTCLPDSIHELESLRILRASSCSSLCDLPHSVSVIPFLSILDLRDCCLTEESFPCDFGQFPSLTDLDLSGNHFVNLPISIHELPKLKCLSLNGCKRLQSLPELPSSIRELKAWCCDSLDTRSFNNLSKACSVFASTSQGPGEVLQMVIPGTNIPSWFVHRQESNCLLVPFPHHCHPSERLGIALCFLVRPSERWFSLSLRLAVGNGDRVITNSIPIWYHQGYHLCMFCMTNDCLIDQETRKAIHFELSFEDINVEYPPEILSSAACWVHTDEIEHLNKGETERPNKKRQKMLEEKH 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02893 1187 Pfam C-JID domain 340 404 IPR045344 -
Aip04g02893 1187 Pfam C-JID domain 1039 1142 IPR045344 -
Aip04g02893 1187 SUPERFAMILY L domain-like 2 307 - -
Aip04g02893 1187 SUPERFAMILY L domain-like 626 1003 - -
Aip04g02893 1187 Gene3D Ribonuclease Inhibitor 12 136 IPR032675 -
Aip04g02893 1187 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 621 1012 - -
Aip04g02893 1187 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 308 - -
Aip04g02893 1187 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 621 1012 IPR044974 GO:0006952
Aip04g02893 1187 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 308 IPR044974 GO:0006952
Aip04g02893 1187 Gene3D Ribonuclease Inhibitor 137 317 IPR032675 -
Aip04g02893 1187 Gene3D Ribonuclease Inhibitor 849 1028 IPR032675 -
Aip04g02893 1187 Gene3D Ribonuclease Inhibitor 683 848 IPR032675 -
Aip04g02893 1187 Pfam Leucine Rich Repeat 46 64 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02893 Aip-Chr4 120565480 120574764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02893 622 941 WRKY Transcription Factor Family AT4G12020 32.544 5.04e-32 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02893 - - adu:107485814 934.48