Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02892 ATGAAGAATCTTGTAGGAATTGATTCAAGAGTCGAAGGAGTGATTAATCTCATAGGTCTTGGGTTGAATGATGTTCGCTATATGGTTATATGGGGAATGGGAGGCATAGGTAAAACGACTATTGCTAGAGCTGTCTTTGAAACCATTCGAAGTAGATTTGAAGTTAGTTGCTTTCTTGCCGATGTAAGGGAGCATTGTGAGAAAAAAGATACTGTCCACATTCAAAAGCAGCTGCTTGATCAAATGAATATAAGTTCATATGCTGTTTATAACAAtaagcgtagcagattgtggtgttatgaggatGTTGATTTTGTACTTACTCAAAAGAAGGAAAGTGAAGCAACTCATAGCATCGTAAGTAAGGTGTATTATTGCGAGACAGAAGAGGAATGGAGAGAGTATCGGGAGATTAAAGAGAATTGGAGAGATTTATCTTTCTCAAATATATGCCAGCTAAAACTTCTCATTTTAGATGGCGTGAATGCTCCCATTCTCTGTGATATTCCTTGTACATTAAAGGTTTTGCACTGGGAAGGTTGTCCAATGGAAACTCTACCCTTTACAGATCAATGCTATGAACTTGTTGAAATTGATTTATCTCATGGCAAAATTGTAGAGTTATGGGATGGAAAGAAGGTTCTGAAAAAGTTAGAACACTTGAATCTGTACTTCTGTGAGAAGCTGAAGCAAACGCCAGATCTTTCTGGGGCTCCCAATCTTAAAACACTTAATCTTCATGGATGTAAGGAGCTGAATTATATTAATCCATCTCTTGCACACCACAAGAGGCTTGTTGAATTGAATTTAGGTAGATGTAGGAGTCTTGAAACACTTGGAGATAAATTGGAGATAAGTTCACTCGAGAAACTAAATCTATATGAGTGCCGTAGTTTGAGAAGACTGCCAGAATTTGGGGAATGCATGAAACAGTTATCGATTCTTGATCTGGAAAAAACAGGTATAGAAGAGCTACCCCCAACGCTTGGAAAGTTGGCTGGCGTGTCTGAGTTGGACTTAACTGGGTGCCACAAGCTTACTAGTCTTCCCTTCCCACTTGGATGTTTCGTTGGCCTAAAGAAGTTGAAGTTGAGTAGATTCGTGGAGCTTAGTTGTGTTCCATACACCACTCATGGGTTAGAGTCCCTCGAGGCTTGGGATTTTTCTAACAGCCCAATTTTTGTTGGACTTTTGTGTTCTCTCTCTCGCCTGACCTCTTTGAGTAGCCTAAAATTACATGGAGAGTATAGCAGATCTAGAGAAGTGTCGACCCTTTACTATGATCTTGGCCACTTAACGTCGTTGACGGATTTGGATTTAGGGTACAGTGATTTTTTAAGAGTTCCAATATGTATCCATGCACTTCCCAGACTTACACGTCTGGATCTATGTTATTGCTATAATTTGGAGGTTTTGCCAGAGCTTCCATCAAGTCTAAGAGAATTACAGGTAAAGGGCTTTGAACCACTGGTTGCATCCAATGTAAATGCTGCTATATCAAAAGCGTGTTGTGGCTTTGCAGAATCAGCTAGCCAAGATCGTGAAGACCTCTTGCAAATGTGGATCAGTGGGAAGGAAATGCCAGCATGGTTTAAGGATCAGAAAAAAGATAACGGAATATCAGTCTCATTCCCCCATAATTGCCCTTCAACTGAAACCATCGCACTTGCTCTCTGTTTCCTATTACAAGGTGTCATCATGGACTTGCCGGAACAGCCATCGGTTATCTGCAATGGTAAAGAATTCATCAACAAGAGTGTATTTCATGTGGTTTTGCCTCTCAAATCTAAGTATTTGTGCATTGTCTGCGTGAATGGTTACTATTTTAGTAACATGTTATGCCAAGACAATCGCTTCCAACTGCAATTTCCCAGTGATTATCGTGGAATCCGAGTACAAAGATCTGGAGCACGTTGGGTGTGCAAGCAAGACATTCAACATTTCAAGCAGTTTGGCATCTCGTAG 1965 0.3969 MKNLVGIDSRVEGVINLIGLGLNDVRYMVIWGMGGIGKTTIARAVFETIRSRFEVSCFLADVREHCEKKDTVHIQKQLLDQMNISSYAVYNNKRSRLWCYEDVDFVLTQKKESEATHSIVSKVYYCETEEEWREYREIKENWRDLSFSNICQLKLLILDGVNAPILCDIPCTLKVLHWEGCPMETLPFTDQCYELVEIDLSHGKIVELWDGKKVLKKLEHLNLYFCEKLKQTPDLSGAPNLKTLNLHGCKELNYINPSLAHHKRLVELNLGRCRSLETLGDKLEISSLEKLNLYECRSLRRLPEFGECMKQLSILDLEKTGIEELPPTLGKLAGVSELDLTGCHKLTSLPFPLGCFVGLKKLKLSRFVELSCVPYTTHGLESLEAWDFSNSPIFVGLLCSLSRLTSLSSLKLHGEYSRSREVSTLYYDLGHLTSLTDLDLGYSDFLRVPICIHALPRLTRLDLCYCYNLEVLPELPSSLRELQVKGFEPLVASNVNAAISKACCGFAESASQDREDLLQMWISGKEMPAWFKDQKKDNGISVSFPHNCPSTETIALALCFLLQGVIMDLPEQPSVICNGKEFINKSVFHVVLPLKSKYLCIVCVNGYYFSNMLCQDNRFQLQFPSDYRGIRVQRSGARWVCKQDIQHFKQFGIS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02892 654 PRINTS Disease resistance protein signature 27 42 - -
Aip04g02892 654 PRINTS Disease resistance protein signature 283 299 - -
Aip04g02892 654 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 93 563 - -
Aip04g02892 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 81 IPR027417 -
Aip04g02892 654 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 73 IPR044974 GO:0006952
Aip04g02892 654 SUPERFAMILY L domain-like 145 486 - -
Aip04g02892 654 Gene3D Ribonuclease Inhibitor 283 504 IPR032675 -
Aip04g02892 654 Gene3D Ribonuclease Inhibitor 171 281 IPR032675 -
Aip04g02892 654 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 73 - -
Aip04g02892 654 Gene3D - 1 169 IPR027417 -
Aip04g02892 654 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 93 563 IPR044974 GO:0006952
Aip04g02892 654 Pfam NB-ARC domain 24 139 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02892 Aip-Chr4 120536377 120540433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02892 3 82 WRKY Transcription Factor Family AT4G12020 35.000 6.59e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02892 - - adu:107485881 692.189