Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02891 atgggcaaacttattgtaattcaagaatctccaaatgatgctagtaagcgtagcagattgtggtgttacgaggatGTTGATTTTGTACTTACTCAAAAGAAGGAAATTGAAGCAACTCATAGCATCGTTCTACATGATATGTACTGTGAGATTGAAGAAAATTGGAGAGACTTGGATATAAGATATTTATCTTTCTCAAATATATGCAAGTTAAACCTTCTCATTTTAGATGGTGAGAGATTTCCCATTCTTCTCTACGATATTCCTTGTGCATTAAAGGTTTTGCACTGGACAGATTGTCCGATGGAAACTCTGCCCTTTAGAGATCATCAACGCTATGAACTTGTGGAAATTGATCTGTCTCATAGTAAAATTGTACAGTTATGGGATGGAAAGAAGGTTCTAAAAAAGTTAGTGCACTTGAATCTCTCCTACTGCAAGGAGCTGAAGGAAATGCCAGATCTTTCTGGGGCTCCCAATCTTAAAACGCTTGATCTTGATGGATGTGAGGAGCTGAATTATTTTCACCCATCTCTGGCACACCACAAGAGCCTTGTTGAATTGAATTTAAGGGGATGTGAGAGACTTGAAACACTTGGAGATAAATTAGAGATGAGTTCACTCGAGAGACTAGATCTAGAATGTTGCAGTAGTTTGAGAAGACTGCCAGAGTTTGGAAAATGTATGAAACAGTTGTCGATTCTTATTTTGAAACGTACAGGTATAGAAGAGCTACCCACCACGCTTGGAAATTTGGCTGGCATGTCTGAGTTGGACTTAACTGGATGCTACAAGCTTACTAGTCTTCCCTTCCCACTTGGATGTTTCGTTGGCCTAAAGAAGTTGAGGTTGAGTAGATTGGTGGAGCTTAGTTGTGTTCCATACAGCACTCATGGGTTAGAGTCCCTCACAGTTAAGGATTATTCTGGCAGCCCAAATATTGTTGGACTTTTGTGTTCTCTCTCTCACTTGACCTCTTTGAGTAGCCTGAAATTACAAGGATGTTTTAGCACATCTAGAGAAGAGTCGACCGATTTTGGCCGCTTAGCGTCCTTGACTGATTTGGATTTATCGGAGAACAATTTTTTAAGGGTTCCAATAAGTATCCATGAACTTCCCAGACTTACACGTCTAAAGCTAAATAATTGCCGTCGCTTGAAGGTTTTGCCAGAGCTTCCATTAAGTCTAAGAGAACTACAAGCACGGGATTGTGATTCACTGGATGCATCCAATGCGAATGATGTTATATTAAAGGCGTGTTGTGGCTTTGCAGAATCAGCTAGTCAAGATCGTGAAGACCTCTTTCAAATGTGGTTCAGTAGGAAGAAAATTCCAGCATGGTTTGAGCATCACGAAGAAGGTAACGGAGTATCAGTCTCATTCTCGCATAATTGCCCTTCAACTGAAACCATCGCACTTGCTCTCTGCTTCCTATTACAAGGTTTTTTGTTCTCATCGGAAAAACCATCGGTGATCTGCAACGGTAAAGAATTCATCAACAAGAGTTTGTTGAAGGCGTCGTCGGGTATATCTTCTGAGAATGTGTACATTGTCTACGTGAACGGTTACTATCTTAGTAAGCTGTTATGCCAACACAATTGCTTCCAAATGCTATTTCCCGGTACTCCTAGTATTAATATCCAAGTACGGAGATCTAGTGCACGTTGGCAGCAACACAAGAGATTTGGCAAGCATGACAAGACAGATTCAGATTCATTACAGAGTGAAGGAGAAAATCTGCACGCCATAACATGA 1755 0.3892 MGKLIVIQESPNDASKRSRLWCYEDVDFVLTQKKEIEATHSIVLHDMYCEIEENWRDLDIRYLSFSNICKLNLLILDGERFPILLYDIPCALKVLHWTDCPMETLPFRDHQRYELVEIDLSHSKIVQLWDGKKVLKKLVHLNLSYCKELKEMPDLSGAPNLKTLDLDGCEELNYFHPSLAHHKSLVELNLRGCERLETLGDKLEMSSLERLDLECCSSLRRLPEFGKCMKQLSILILKRTGIEELPTTLGNLAGMSELDLTGCYKLTSLPFPLGCFVGLKKLRLSRLVELSCVPYSTHGLESLTVKDYSGSPNIVGLLCSLSHLTSLSSLKLQGCFSTSREESTDFGRLASLTDLDLSENNFLRVPISIHELPRLTRLKLNNCRRLKVLPELPLSLRELQARDCDSLDASNANDVILKACCGFAESASQDREDLFQMWFSRKKIPAWFEHHEEGNGVSVSFSHNCPSTETIALALCFLLQGFLFSSEKPSVICNGKEFINKSLLKASSGISSENVYIVYVNGYYLSKLLCQHNCFQMLFPGTPSINIQVRRSSARWQQHKRFGKHDKTDSDSLQSEGENLHAIT 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02891 584 PANTHER - 345 429 - -
Aip04g02891 584 PANTHER - 102 340 - -
Aip04g02891 584 Gene3D Ribonuclease Inhibitor 205 415 IPR032675 -
Aip04g02891 584 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 345 429 - -
Aip04g02891 584 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 102 340 - -
Aip04g02891 584 MobiDBLite consensus disorder prediction 560 584 - -
Aip04g02891 584 SUPERFAMILY L domain-like 65 405 - -
Aip04g02891 584 Gene3D Ribonuclease Inhibitor 29 204 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02891 Aip-Chr4 120523493 120526649 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02891 2 330 WRKY Transcription Factor Family AT4G12020 33.333 2.60e-36 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02891 - - adu:107485881 704.131