Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02888 ATGGCTGAGACCACACCCAATCACACACAAACCGTTTTTGGATGGGCTGCTCATGATTCTTCTGGCAACATAACCCCCTACACTTTCAAAAGAAGGGAGAACGGTGTTAATGACGTGAGCATAGAGATCTTGTACTGCGGGATTTGCCACACGGACATTCACTACGTCAAAAATGAATGGGGAATCACTAGGTACCCGGTTGTTCCGGGGCACGAGATCGTTGGGGTGGTAAGCAAGGTGGGGAGGGAAGTGAATGGATTCAAAGGTGGATGGTGCTATAATGTTAGTGAGAAGGATGGTGGATGA 306 0.4837 MAETTPNHTQTVFGWAAHDSSGNITPYTFKRRENGVNDVSIEILYCGICHTDIHYVKNEWGITRYPVVPGHEIVGVVSKVGREVNGFKGGWCYNVSEKDGG 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02888 101 PANTHER ALDEHYDE REDUCTASE 1 90 - -
Aip04g02888 101 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 90 - -
Aip04g02888 101 Pfam Alcohol dehydrogenase GroES-like domain 37 90 IPR013154 -
Aip04g02888 101 Gene3D - 16 90 - -
Aip04g02888 101 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Aip04g02888 101 SUPERFAMILY GroES-like 7 90 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02888 Aip-Chr4 120505376 120505747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02888 13 90 Monolignol Biosynthesis Gene Families AT2G21890 60.256 1.09e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02888 K00083 - ahf:112797497 181.415