Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02887 ATGGTGCTAAAGGAAGAGGTGCATAAAACTTATAACGTTGAAGGGTTAATGGAAAGTGAAGCCCTTAACCTCTTTTCTTTAGAAGCTTTTAACCTGCCAAAACCTTCAGAAGAGTTTTTGGAGTTGTCCAAAGAAGTGGTCAAATACAGCGGtggtctcccattggcacttaaagtattgggttcctatcttaatggtagagCCTTCTCCAAACTAAAGCTGTCAAAACTTCTCATATTATGTGGTGTGGAAGTGGAAGTGGAACCTCCATCCGACCTTCCTTGCCTTCCTAGCACATTAAAAGTTCTGCACTGGTGGAGATGTCCTTTGAAAACACTACCCCTTGCAGAAACAGAACATGAATTTGCTGAAATTGAACTACGATTTAGCAGAATTGAGGAACTTTGGCTTGGGAAAAAGTTTCTTGGAAACCTGAAATACTTGAATTTGAGTCATTCATGGTATTTAAAGGAAACACCTGACTTTTCTGGGACTCCTATTCTTGAAACACTTATTCTTGGTGACTGTCCAGACCTCAGAGAGGTTCATCCATCCCTTGTACTACATGAGAATCTTGTTCTGTTGGACTTAAGCAAGTGTATAAGTCTTAAAACTTTTCCGGGAATACTGTATATGACATCCCTCAAGGAGTTAATTCTAAAGGACTGCCGGAGTTTTGAAAATAGACCAGAATTCGGGGAGTGCATGAAACAGTTATCCAGGCTATGTTTAGAGGGAACGGCTATTACTGTATGTTTAGAAACTTACTAG 771 0.3735 MVLKEEVHKTYNVEGLMESEALNLFSLEAFNLPKPSEEFLELSKEVVKYSGGLPLALKVLGSYLNGRAFSKLKLSKLLILCGVEVEVEPPSDLPCLPSTLKVLHWWRCPLKTLPLAETEHEFAEIELRFSRIEELWLGKKFLGNLKYLNLSHSWYLKETPDFSGTPILETLILGDCPDLREVHPSLVLHENLVLLDLSKCISLKTFPGILYMTSLKELILKDCRSFENRPEFGECMKQLSRLCLEGTAITVCLETY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02887 256 PRINTS Disease resistance protein signature 50 64 - -
Aip04g02887 256 PRINTS Disease resistance protein signature 210 226 - -
Aip04g02887 256 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 69 IPR044974 GO:0006952
Aip04g02887 256 SUPERFAMILY L domain-like 67 251 - -
Aip04g02887 256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 67 IPR027417 -
Aip04g02887 256 Pfam NB-ARC domain 6 68 IPR002182 GO:0043531
Aip04g02887 256 Gene3D - 15 76 IPR042197 -
Aip04g02887 256 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 96 249 IPR044974 GO:0006952
Aip04g02887 256 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 69 - -
Aip04g02887 256 Gene3D Ribonuclease Inhibitor 98 255 IPR032675 -
Aip04g02887 256 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 96 249 - -
Aip04g02887 256 Coils Coil 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02887 Aip-Chr4 120450767 120452579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02887 90 239 WRKY Transcription Factor Family AT4G12020 33.544 3.36e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02887 - - ahf:112744165 358.221