Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02885 ATGTCCATAAACGAGGATGATGTGAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGATGCTGCTGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAAACGACATGGTTAGGGATAATCAAGGTACAATCATTAGTAGGCAACTTGTTTGCAACAAAGAGGGTTGGAGGAATATGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCAGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATATTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGGTTCTGGCCAATCGTCGTCTCACTGTCACTGATAAAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGACCTGCCATATTATGGGGTATATTGCGTTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGCAAAGATTTGTACAACTACATTGATTGTTATCATCGGTCAAAGGTTAAAAACGGAGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGTTGTTTTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTCGAGCATATTTTTTGGGCAGATGGGCAGTCATTTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTCCAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCCGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGACCTACTATCCGACAAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCATTGTTGAAGCGATGGGTGGGAAAAGTCCTAAAGCAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAGTCAAGAATGTTCTTCCTGATGCGGCCCATCGGTTATGCGGATGGCATCCGCAGAGAAATGCATGTGAAAATATAAAGAATTCTAATCTTCTGCACGATTTTAAGGGTCTTATATACGACAACAACGACCACAGAGACTTCGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGGAGTACCTGGATGGAAAAGACGTACGAAACTCATTCGATGTGGTCTCATTGTTTCCTCTGGGATAAGTTTTTTGGTTACATAAGGACGACATCACAGTGA 1236 0.4337 MSINEDDVKNDSDNDLGDDFDYQPNAEDAAEDDDVDSLDSTSKSEENDMVRDNQGTIISRQLVCNKEGWRNMRYLDLDDRSREARSLTRTKCPAQLRVKLDYGCGRWKVSYFVESHNHDLTPPQFAHLVLANRRLTVTDKVQVENLHNFGVKTCHIMGYIAFQKGGYRHAGFTRKDLYNYIDCYHRSKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSFIDYHCFGDIVAFDSTSKKNKYNKPLVIFSGCNHHGQTVIFGSDLLSDKTTETYKWLLETIVEAMGGKSPKAVITDGDLAMRDAVKNVLPDAAHRLCGWHPQRNACENIKNSNLLHDFKGLIYDNNDHRDFDRRWAAILDKHNLVGSTWMEKTYETHSMWSHCFLWDKFFGYIRTTSQ 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02885 411 Pfam MULE transposase domain 243 335 IPR018289 -
Aip04g02885 411 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 401 IPR031052 GO:0006355
Aip04g02885 411 MobiDBLite consensus disorder prediction 11 35 - -
Aip04g02885 411 MobiDBLite consensus disorder prediction 1 52 - -
Aip04g02885 411 Pfam FAR1 DNA-binding domain 51 121 IPR004330 -
Aip04g02885 411 MobiDBLite consensus disorder prediction 36 50 - -
Aip04g02885 411 PANTHER OS02G0262500 PROTEIN 65 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02885 Aip-Chr4 120430301 120431665 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip04g02885 MULE 1.4e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02885 - - aip:107614789 749.199