Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02884 ATGGACCAGCATAGAGCCACACTATGCTGCCAATGGCTCCAATGCAAACCACGTTCTTCATGCAGCAGCAAGAACAAACTGAAAGAAACTCTCATGGATTCTGATGATTCTACAGTTAAGGTGCCGTTTTCAAGCACGATGAAGGTAGCAAACGCCTTTGGTTACTGTCTTGAAGGGGCTAACGAGGAGGAGGAGAGGATGATGAATATCAAGAAAACAAAAAGAGACTGTTTCATTCAAAATAAAGAGTATGATTTCAACGATGATGAACTTGAAGTTGTTGATGTTCTGTTTAACCTCCCCAGAAACTTCTTAGAGAGGGTTAATTTAGAGACTTCAATCAGCGTTGTGAATTCAAGCTCCAGTGCCGATCAAGAACGGGTTTCAAAGGAGGCTTCCAAGAAAGAAACAAAGAAACCAGTCAACCAAGAAAGAAACAGCCCCAGTGCTGTGAATTCAGGGCCAAGTGCTGATCAAGAACGGGTTTCAAACATGAATTCCAACAAGACCGTTAACTTAGTGGATTCTCAGCTCAACCAAGAACCAGTCAACCAAGAACCAGTCAACCAAGAATCCTCTGAATTGCCACAAAATTTCAAGAACTTGATAAGTGATATGGGTGGCAGCAGGATCACTCTGCTTATCGAAAAAACTCTCTACCCCTCGGATTTGAATCCGCAACAAAACCGGCTTTCAATACCGTCACAGCGGGTCAAGGACAAAGATTTCTTGCTTCCTACGGAACTTGAAACTCTAGAGGAGAAAAAGGGAATAAAAGTGAAACTGATCCAACCGTCGCTGGAAATCACCGAGTTGACTTTGATTAAGTGGTTCATGCACAAGGGTCCAAAGTCAGAGAAAGTAAGCGTTTCTTATATTCTGAGGTCAAATTGGGTCAAAGTTGCAAAGGCTAACAACCTACAAAAGGATGATGTCATTCAAGTTTGGTCATTCCGAGTTGAAGATAAATTATGCATGGCAATTGTCAAGCTTTGA 996 0.4207 MDQHRATLCCQWLQCKPRSSCSSKNKLKETLMDSDDSTVKVPFSSTMKVANAFGYCLEGANEEEERMMNIKKTKRDCFIQNKEYDFNDDELEVVDVLFNLPRNFLERVNLETSISVVNSSSSADQERVSKEASKKETKKPVNQERNSPSAVNSGPSADQERVSNMNSNKTVNLVDSQLNQEPVNQEPVNQESSELPQNFKNLISDMGGSRITLLIEKTLYPSDLNPQQNRLSIPSQRVKDKDFLLPTELETLEEKKGIKVKLIQPSLEITELTLIKWFMHKGPKSEKVSVSYILRSNWVKVAKANNLQKDDVIQVWSFRVEDKLCMAIVKL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02884 331 MobiDBLite consensus disorder prediction 117 163 - -
Aip04g02884 331 MobiDBLite consensus disorder prediction 143 163 - -
Aip04g02884 331 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 102 331 - -
Aip04g02884 331 Gene3D - 204 330 IPR015300 -
Aip04g02884 331 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 102 331 IPR005508 GO:0003677
Aip04g02884 331 SUPERFAMILY DNA-binding pseudobarrel domain 213 327 IPR015300 -
Aip04g02884 331 MobiDBLite consensus disorder prediction 127 142 - -
Aip04g02884 331 CDD B3_DNA 214 330 IPR003340 GO:0003677
Aip04g02884 331 Pfam B3 domain-containing protein At2g31720-like 199 303 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02884 Aip-Chr4 120426208 120427203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02884 189 328 B3 DNA Binding Superfamily AT1G05930 27.891 2.62e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02884 - - adu:110280249 525.398