Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02881 ATGGGCAAACGAATTGTAATTCAGGAATCTCAGAATGTTGTTTGTAAGCGTAGCAGATTGTGGTGTTTGGAGGATGTTGAATTTGTACTTACTCAAAAGAAAAAAACTAAAGCAACTCATGGCATCGTTCTACATGAGTGGTATAGCGAGACTGAAGTGAATCAGAGAGATTTATCTTTCTCAAAATTGTGCCAGTTAAAGCTACTCATTTTAGATGGCGTGAAAGCTCCCATTCTCTGCGATATTCCTTGTACATTAAAGGTATTTTGCTGGAGACGTTGTCCAATGAAAACTCTGCCCCTTACAGATCATCAACGCTATGAGCTTGTTGAAATTAATCTGTCTAAAAGCCAAATTGCAGAGTTATGGGATGGAAAGAAGGTTTTAGAAAACTTAGAGCACTTATATCTATCATGGTGCAAGCAGCTGAAGCAAACGCCAGATCTTTCTGGGGCTCCCAATCTTAAAAAACTTAATCTTCGGGGATGCGAGGAGCTGGATTATATTCACCCGTCTCTCGCACACCACAAAAGGCTTGTTGAATTGAATTTAGAAGATTGTAAGAGACTTGAAACACTTGGAGATAAATTGGAGATGAGTTCACTCGAGAAACTAGATCTTGATAGCTGCAGTAGTTTGAGAAGACTGCCAGAATTTGGGGAATGCATGAAAAAGTTATCGATTCTTAATCTGAGAAATACAGGTATAGAAGAGCTACCCCCAACGCTTGGAAATTTGGCTGGCGTGTCTGAGTTGAACTTAAGTGGATGCGACAAGATTACTGGTCTTCTCTTATCACTTGGATGTTTCGTTGGCCTTAAAAAGTTGGTGTTACGTGCTCTTCCACAGAAAACTGATGGGTTAGAGTCCCTCACAGTCAGAGCTGATTATGATGATTCTGACAGCTCATCTAGAGAAGAGTCGACCCTTTCCTATGATATTGCCCACTTAGCCTCGTTGACGTATTTGGATTTATCTCGGAACAGGTTTTTAAGAGTTCCTATAAGTATCCATCAACTTCCCAGACTTACACATCTAAAGCTATCTTTTTGCGATGAATTGGAGGTTTTACCAGAGCTTCCATCAAGTCTAAGAGAATTAGACGCACAGGGTTGTTATTCACTGGATAAATCATATGTTGATGATGTCATATCAAAGACGTGTTGTGGCTTTGCAGAATCAGCTAGCCAAGATCGTGAAGACTTCTTGCAAATGATGATCACAGGGGAGGAAATTCCAGCATGGTTTGAGCATCAGGAAGAAGATGAGGGAGTATCAGTCTCATTCCCACTTAATTGCCCTTCAACTGAAATGGTCGCACTTGCTCTCTGTTTCCTATTTAACGGTATCGAAGGATTACAGCCTTCGGTGATCTGCAACGGGAAAGAATTCATTAACGCGAGTTTTTACTGGTGGTCTAGTTTATATAATTTGTTGTTCATTGTGTGCGTGAACGGTTACTATTTTAGTAAGCTGTTATGCCACCACAATCGCTTCCAAATGTTATTTCCATATGCTGACCATCTTGGTATCCGAGTACAGAGATGTGGAGCACGTTGGGTGTACAAGCAAGACATTCAAGATTTCAAGAAAAGAAAAGCAACTCTAGAAGACTTCAACTGA 1623 0.4048 MGKRIVIQESQNVVCKRSRLWCLEDVEFVLTQKKKTKATHGIVLHEWYSETEVNQRDLSFSKLCQLKLLILDGVKAPILCDIPCTLKVFCWRRCPMKTLPLTDHQRYELVEINLSKSQIAELWDGKKVLENLEHLYLSWCKQLKQTPDLSGAPNLKKLNLRGCEELDYIHPSLAHHKRLVELNLEDCKRLETLGDKLEMSSLEKLDLDSCSSLRRLPEFGECMKKLSILNLRNTGIEELPPTLGNLAGVSELNLSGCDKITGLLLSLGCFVGLKKLVLRALPQKTDGLESLTVRADYDDSDSSSREESTLSYDIAHLASLTYLDLSRNRFLRVPISIHQLPRLTHLKLSFCDELEVLPELPSSLRELDAQGCYSLDKSYVDDVISKTCCGFAESASQDREDFLQMMITGEEIPAWFEHQEEDEGVSVSFPLNCPSTEMVALALCFLFNGIEGLQPSVICNGKEFINASFYWWSSLYNLLFIVCVNGYYFSKLLCHHNRFQMLFPYADHLGIRVQRCGARWVYKQDIQDFKKRKATLEDFN 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02881 540 Gene3D Ribonuclease Inhibitor 300 382 IPR032675 -
Aip04g02881 540 Gene3D Ribonuclease Inhibitor 197 296 IPR032675 -
Aip04g02881 540 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 116 376 - -
Aip04g02881 540 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 63 218 - -
Aip04g02881 540 Pfam C-JID domain 408 526 IPR045344 -
Aip04g02881 540 SUPERFAMILY L domain-like 58 376 - -
Aip04g02881 540 Gene3D Ribonuclease Inhibitor 49 196 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02881 Aip-Chr4 120355735 120357636 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02881 2 346 WRKY Transcription Factor Family AT4G12020 31.768 2.09e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02881 - - adu:107485881 780.4