Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02841 ATGCGGTTGCATCTTCTTCTCCAAAATGCGCGCAGATTCTCTTTTATAGCTTCCCCATCTTCTTCTCCAAGGAAATGGAGAATTGAAGAGCTCACTACTCGTACCATCAACGCTGCTGACGTCATGAGAGCTCATCCTAACCATATCCTCAAGAAATATTCTCCCTCCAACCTCCTCATCGTTCCTCCCCACGCTGACTTCCATCGCGGCAACATCTACTTCCTCGTTCCCCTCCCTCCCCCTCCCAACCAACACGCTACAACAGTAGATCAACAGCTCTCCACCTCCACTCACACAAGCACCAGCTGCCGTCTTACTCTCTGGAGGTATGATTGGTTGGCAAAGAGGAACCTTCGGTCTGGATACTTCATGTGGGCAATGAGTGCTTACGGTTTAGGTCTCCTTATTACATATGTTGCTTTGAACTTGATGGATGGGCATGGTCAACCAGCATTGCTTTATATCGTCCCGTTTACTCTTGATACCTTTTACTCTTCTAACATGGGTTATGTGGAGCCTATCCCTGTATACTTTCCTGATTACACAGATGCTGATCTTTGCAAAATATTGTCGAGAAACCAAGCAGACTCGAAGCTGTATTCTTCATTCTTGGACTTTGTTGCCATAGGAGGAGTCTACATTGGTGTTAAGCAGTTGGTGCAGAACGCTAGGATGAAGAGGGATCTTGTCAATGGTGCTGTAGGTGTGCAACTGTTCTGGGTTACAAAGATGGTTGGTCAGTTAATGTGTCTGCAAATACTGGCACTGGAAGAAGTCAATATGTGA 786 0.4618 MRLHLLLQNARRFSFIASPSSSPRKWRIEELTTRTINAADVMRAHPNHILKKYSPSNLLIVPPHADFHRGNIYFLVPLPPPPNQHATTVDQQLSTSTHTSTSCRLTLWRYDWLAKRNLRSGYFMWAMSAYGLGLLITYVALNLMDGHGQPALLYIVPFTLDTFYSSNMGYVEPIPVYFPDYTDADLCKILSRNQADSKLYSSFLDFVAIGGVYIGVKQLVQNARMKRDLVNGAVGVQLFWVTKMVGQLMCLQILALEEVNM 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02841 261 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 108 165 - -
Aip04g02841 261 Pfam Signal peptide peptidase 107 162 IPR007369 GO:0004190|GO:0016021
Aip04g02841 261 PANTHER SIGNAL PEPTIDE PEPTIDASE 108 165 IPR007369 GO:0004190|GO:0016021
Aip04g02841 261 Pfam PADRE domain 30 87 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02841 Aip-Chr4 119548395 119552349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02841 164 207 Core DNA Replication Machinery Family AT4G29910 61.364 8.04e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02841 K09597 - ahf:112795250 163.31